RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SLC5A3P53794 718 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CTBP1Q13363 440 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 SPATA6LQ8N4H0 392 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 PACRGLQ8N7B6 248 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 ZBTB8BQ8NAP8 495 aaPredicted RBP10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 RBM38Q9H0Z9 239 aaKnown RBP10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 GBA3Q9H227 469 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 IGKV6-21A0A0C4DH24 114 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 TCAF2A6NFQ2 919 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 DFFAO00273 331 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 DAB1O75553 588 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 ZNF12P17014 697 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 NMBRP28336 390 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 PNPLA4P41247 253 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 ZNF470Q6ECI4 717 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 BBS5Q8N3I7 341 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 PPP1R2P1Q96PQ5 205 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 ADI1Q9BV57 179 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 HIPK3Q9H422 1215 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 FAIMQ9NVQ4 179 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 MTMR10Q9NXD2 777 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CACNA2D2Q9NY47 1150 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 NDUFAF1Q9Y375 327 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 BCL10O95999 233 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 ADRA1BP35368 520 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 NUMBP49757 651 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 PLK1P53350 603 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 NEDD8Q15843 81 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CCDC92Q53HC0 331 aaPredicted RBP10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CANT1Q8WVQ1 401 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CENPIQ92674 756 aaPredicted RBP10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 ISL2Q96A47 359 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 C12orf43Q96C57 262 aaKnown RBP10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 SPATC1LQ9H0A9 340 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 C8orf4Q9NR00 106 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 SNTG2Q9NY99 539 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 SUN2Q9UH99 717 aa10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 CNOT6Q9ULM6 557 aaKnown RBP10.87□□□□□ -0.67
ATP2C1-204ENST00000428331 SCN9AQ15858 1988 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 SNAP91O60641 907 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 NCAM1P13591 858 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 RPS12P25398 132 aaKnown RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TAF6P49848 677 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 GEMP55040 296 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ATP1A4Q13733 1029 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 PAFAH1B3Q15102 231 aaKnown RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 APOBEC3FQ8IUX4 373 aaKnown RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TMEM130Q8N3G9 435 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 OR6P1Q8NGX9 317 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.86□□□□□ -0.672e-7■■■■■ 62.8
ATP2C1-204ENST00000428331 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ZCWPW2A0A1B0GU75 182 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 DYTNA2CJ06 578 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 C16orf96A6NNT2 1141 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TMEM233B4DJY2 109 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 SDHDO14521 159 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ACOT8O14734 319 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 F9P00740 461 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 STT3AP46977 705 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ITKQ08881 620 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 BNIP2Q12982 314 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 CLEC14AQ86T13 490 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 CUZD1Q86UP6 607 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TICAM1Q8IUC6 712 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ATPAF2Q8N5M1 289 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 BEGAINQ9BUH8 593 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 WDCPQ9H6R7 721 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 C7orf72A4D263 438 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 INPP4BO15327 924 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 MAGEB3O15480 346 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ONECUT3O60422 494 aaPredicted RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 GRM5P41594 1212 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 MAGEA12P43365 314 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TMTC4Q5T4D3 741 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 CHSY3Q70JA7 882 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ISOC1Q96CN7 298 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 HOPXQ9BPY8 73 aaPredicted RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 RHOBTB2Q9BYZ6 727 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ITGB1BP2Q9UKP3 347 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 PCDHGB4Q9UN71 923 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 PCDHGB5Q9Y5G0 923 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 FADS3Q9Y5Q0 445 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 PMPCBO75439 489 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 C8BP07358 591 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 POU4F1Q01851 419 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 TRAF2Q12933 501 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 CYP51A1Q16850 503 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 FAM187BQ17R55 369 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 ZNF829Q3KNS6 432 aaPredicted RBP10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 SV2CQ496J9 727 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 PPP4R4Q6NUP7 873 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 KDELC2Q7Z4H8 507 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 SEPT8Q92599 483 aa10.86□□□□□ -0.67
ATP2C1-204ENST00000428331 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms