RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CRHR1P34998 444 aa26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 ARCN1P48444 511 aaKnown RBP26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 SIRPB2Q5JXA9 342 aa26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 RTL10Q7L3V2 364 aa26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 SPRED2Q7Z698 418 aa26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 ISL2Q96A47 359 aa26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 SH3BP1Q9Y3L3 701 aa26.9■■□□□ 1.9
SH3GL3-202ENST00000427482 CBX4O00257 560 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 PDE1BQ01064 536 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 FSCBQ5H9T9 825 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 KIAA0930Q6ICG6 404 aaPredicted RBP26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 C6orf89Q6UWU4 347 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 CNTN4Q8IWV2 1026 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 ZNF75CPQ92670 426 aaPredicted RBP26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 HCFC1R1Q9NWW0 138 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 SLC2A6Q9UGQ3 507 aa26.89■■□□□ 1.9
SH3GL3-202ENST00000427482 GOLGA8TH3BQL2 631 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 SERPINF2P08697 491 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 PAMP19021 973 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 ARNTP27540 789 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 MAGEA12P43365 314 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 EPHA5P54756 1037 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 ARF5P84085 180 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 CPXM2Q8N436 756 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 SLC46A2Q9BY10 475 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 ARHGEF15O94989 841 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 VAPBO95292 243 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 EPOP01588 193 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 CCR2P41597 374 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 CDK18Q07002 472 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 ITIH4Q14624 930 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 CYTH1Q15438 398 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 CNGA3Q16281 694 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 DCLK2Q8N568 766 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 MICAL1Q8TDZ2 1067 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 IFT43Q96FT9 208 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 CABS1Q96KC9 395 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 PITPNM3Q9BZ71 974 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 MAN1C1Q9NR34 630 aa26.88■■□□□ 1.89
SH3GL3-202ENST00000427482 NOTCH4Q99466 2003 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 ATXN2Q99700 1313 aaKnown RBP26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 WDR91A4D1P6 747 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 TIMM44O43615 452 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 SIN3BO75182 1162 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 CR2P20023 1033 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 HLA-DPA1P20036 260 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 MZF1P28698 734 aaPredicted RBP26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 RGRP47804 291 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 SERPINB4P48594 390 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 CAMK1Q14012 370 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 PDE1CQ14123 709 aaPredicted RBP26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 TSTD2Q5T7W7 516 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 FSTL4Q6MZW2 842 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 CGB2Q6NT52 195 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 FAM47EQ6ZV65 393 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 TTC16Q8NEE8 873 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 SHKBP1Q8TBC3 707 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 OR51B4Q9Y5P0 310 aa26.87■■□□□ 1.89
SH3GL3-202ENST00000427482 RFPL2O75678 378 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 ZMPSTE24O75844 475 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 PAPSS2O95340 614 aaPredicted RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 FGF1P05230 155 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 F7P08709 466 aaPredicted RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 IRS1P35568 1242 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 SERPINB8P50452 374 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 BBS7Q8IWZ6 715 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 GRAMD1AQ96CP6 724 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 FEM1AQ9BSK4 669 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 NOD2Q9HC29 1040 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 LAMA2P24043 3122 aaKnown RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 LEFTY2O00292 366 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 GRM6O15303 877 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 FGF19O95750 216 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 CD160O95971 181 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 RB1P06400 928 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 MYOGP15173 224 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 CDH18Q13634 790 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 ANKS4BQ8N8V4 417 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 TDRD5Q8NAT2 981 aaKnown RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 WFDC5Q8TCV5 224 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 ATP2A3Q93084 1043 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 ATXN7L3BQ96GX2 97 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 VPS39Q96JC1 886 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 TRIB3Q96RU7 358 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 LBHD1Q9BQE6 289 aaPredicted RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 SNX15Q9NRS6 342 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 ARHGAP26Q9UNA1 814 aa26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 MTO1Q9Y2Z2 717 aaKnown RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 USP15Q9Y4E8 981 aaPredicted RBP26.86■■□□□ 1.89
SH3GL3-202ENST00000427482 MROH6A6NGR9 719 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 INSIG1O15503 277 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 SNAP91O60641 907 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 EDF1O60869 148 aaKnown RBP26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 GLRA3O75311 464 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 TYK2P29597 1187 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 SPATA21Q7Z572 469 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 ALG14Q96F25 216 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 MANSC1Q9H8J5 431 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 SLCO1B3Q9NPD5 702 aa26.85■■□□□ 1.89
SH3GL3-202ENST00000427482 PHTF1Q9UMS5 762 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms