RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 TTC9BQ8N6N2 239 aa8.66□□□□□ -1.02
SH3D19-204ENST00000427414 CDKL2Q92772 493 aa8.66□□□□□ -1.02
SH3D19-204ENST00000427414 KLHL5Q96PQ7 755 aa8.66□□□□□ -1.02
SH3D19-204ENST00000427414 NR1H4Q96RI1 486 aaPredicted RBP8.66□□□□□ -1.02
SH3D19-204ENST00000427414 PRKD2Q9BZL6 878 aa8.66□□□□□ -1.02
SH3D19-204ENST00000427414 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
SH3D19-204ENST00000427414 ALG13Q9NP73 1137 aaKnown RBP8.66□□□□□ -1.02
SH3D19-204ENST00000427414 FBXO6Q9NRD1 293 aaPredicted RBP8.66□□□□□ -1.02
SH3D19-204ENST00000427414 COX16Q9P0S2 106 aa8.66□□□□□ -1.02
SH3D19-204ENST00000427414 ZC3H7BQ9UGR2 993 aaKnown RBP8.66□□□□□ -1.02
SH3D19-204ENST00000427414 G3BP2Q9UN86 482 aaKnown RBP8.66□□□□□ -1.02
SH3D19-204ENST00000427414 TCRBV7S3A2A0A539 114 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 PRRG1O14668 218 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 TM9SF1O15321 606 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 C1QAP02745 245 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 ATXN8OSP0DMR3 200 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 PGM1P36871 562 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 ARPP19P56211 112 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 CDH17Q12864 832 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 SERINC3Q13530 473 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 SLC12A1Q13621 1099 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 TAF12Q16514 161 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 BBS9Q3SYG4 887 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 RWDD4Q6NW29 188 aaKnown RBP8.65□□□□□ -1.02
SH3D19-204ENST00000427414 FBXL22Q6P050 247 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 TMEM135Q86UB9 458 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 MRPL43Q8N983 215 aaKnown RBP8.65□□□□□ -1.02
SH3D19-204ENST00000427414 PRR11Q96HE9 360 aaPredicted RBP8.65□□□□□ -1.02
SH3D19-204ENST00000427414 ZNF512Q96ME7 567 aaPredicted RBP8.65□□□□□ -1.02
SH3D19-204ENST00000427414 SPATA16Q9BXB7 569 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 C12orf65Q9H3J6 166 aaKnown RBP8.65□□□□□ -1.02
SH3D19-204ENST00000427414 ATP13A1Q9HD20 1204 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 LMCD1Q9NZU5 365 aa8.65□□□□□ -1.02
SH3D19-204ENST00000427414 NYNRINQ9P2P1 1898 aaKnown RBP8.65□□□□□ -1.03
SH3D19-204ENST00000427414 TEX28O15482 410 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 COCHO43405 550 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 LPXNO60711 386 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 PRAMEF11O60813 436 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 SIN3BO75182 1162 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 PAPSS2O95340 614 aaPredicted RBP8.65□□□□□ -1.03
SH3D19-204ENST00000427414 PEX11BO96011 259 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 POLBP06746 335 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 PSMA3P25788 255 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 PGFP49763 221 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 RABGGTBP53611 331 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 MSS51Q4VC12 460 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 IZUMO2Q6UXV1 221 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 Q6ZNB5 142 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 HTR3DQ70Z44 454 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 LRRC6Q86X45 466 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 ARHGAP24Q8N264 748 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 FAM161BQ96MY7 647 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 GCNAQ96QF7 691 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 TUBGCP5Q96RT8 1024 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 KIFC1Q9BW19 673 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 MAGEB5Q9BZ81 275 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 OCEL1Q9H607 264 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 NOL6Q9H6R4 1146 aaKnown RBP8.65□□□□□ -1.03
SH3D19-204ENST00000427414 MANSC1Q9H8J5 431 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 IL21Q9HBE4 155 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 TMPRSS4Q9NRS4 437 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 ZDHHC7Q9NXF8 308 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 HCSTQ9UBK5 93 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 ANGPTL2Q9UKU9 493 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 SH3BP1Q9Y3L3 701 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 TTLL3Q9Y4R7 772 aa8.65□□□□□ -1.03
SH3D19-204ENST00000427414 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.03
SH3D19-204ENST00000427414 A0A1B0GVM2 712 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TCAF2A6NFQ2 919 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 GOLGA8RI6L899 631 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 ZBTB24O43167 697 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MSI1O43347 362 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 KDELR3O43731 214 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 RAMP2O60895 175 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 KRT37O76014 449 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 KRT38O76015 456 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 STC2O76061 302 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 PYGBP11216 843 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 CD68P34810 354 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 ADRA1AP35348 466 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 CPA2P48052 419 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 SLC18A2Q05940 514 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TWF1Q12792 350 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TCP10LQ8TDR4 215 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 DCAKDQ8WVC6 231 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 ISL2Q96A47 359 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 IMP4Q96G21 291 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 B3GALT6Q96L58 329 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 WDR83Q9BRX9 315 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 CENPKQ9BS16 269 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TSSK1BQ9BXA7 367 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TMEM120AQ9BXJ8 343 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 ACE2Q9BYF1 805 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 SIK2Q9H0K1 926 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MMADHCQ9H3L0 296 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 PDFQ9HBH1 243 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 CHCHD3Q9NX63 227 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 IPO11Q9UI26 975 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms