RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ATP11CQ8NB49 1132 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PRSS33Q8NF86 280 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 VOPP1Q96AW1 172 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ERLEC1Q96DZ1 483 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 RBM41Q96IZ5 413 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 HHIPQ96QV1 700 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 HERPUD2Q9BSE4 406 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 MAK16Q9BXY0 300 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PRDM16Q9HAZ2 1276 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PDFQ9HBH1 243 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ENAMQ9NRM1 1142 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 TRMT1Q9NXH9 659 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 EBF1Q9UH73 591 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 IPO11Q9UI26 975 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 SLC25A13Q9UJS0 675 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 HPCAL4Q9UM19 191 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 MUC22E2RYF6 1773 aaPredicted RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 CKAP5Q14008 2032 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 NYNRINQ9P2P1 1898 aaKnown RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 CCDC163A0A0D9SF12 145 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 EDDM13A0A1B0GTR0 161 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TCRBV21S2A2A0A5A6 115 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 ZSCAN5CA6NGD5 496 aaPredicted RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 SHISA8B8ZZ34 492 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 DFFAO00273 331 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 APOL1O14791 398 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 OIP5O43482 229 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 MFSD11O43934 449 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 CST8O60676 142 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 APBB3O95704 486 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 PXNP49023 591 aaPredicted RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 FNTBP49356 437 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 SERPINH1P50454 418 aaKnown RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 GALNT2Q10471 571 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 PPP2R5EQ16537 467 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 OCLNQ16625 522 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 ACCSLQ4AC99 568 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 DCAF12L1Q5VU92 463 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 NPNTQ6UXI9 565 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 BBS12Q6ZW61 710 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 BTLAQ7Z6A9 289 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 RFX6Q8HWS3 928 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TMPRSS6Q8IU80 811 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 LRRC49Q8IUZ0 686 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 STK40Q8N2I9 435 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 GOLGA6L1Q8N7Z2 621 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TSTD1Q8NFU3 115 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TRIM58Q8NG06 486 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 OR2A12Q8NGT7 310 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 OR2T3Q8NH03 318 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 CASKIN2Q8WXE0 1202 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 ISG20Q96AZ6 181 aaKnown RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 MRGPRX1Q96LB2 322 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TSGA13Q96PP4 275 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 PRRX2Q99811 253 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 HEMGNQ9BXL5 484 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 TLR10Q9BXR5 811 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 OSBPL8Q9BZF1 889 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 CEP44Q9C0F1 390 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 MKRN2Q9H000 416 aaKnown RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 SLC6A17Q9H1V8 727 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 RSPH9Q9H1X1 276 aaPredicted RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 KCNH6Q9H252 994 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 KCND1Q9NSA2 647 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 DTLQ9NZJ0 730 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 SAE1Q9UBE0 346 aaPredicted RBP7.54□□□□□ -1.2
LINC01049-201ENST00000426840 EFR3BQ9Y2G0 817 aa7.54□□□□□ -1.2
LINC01049-201ENST00000426840 H0Y858 1186 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 RNF103O00237 685 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 MCF2LO15068 1137 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 SYNCRIPO60506 623 aaKnown RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 LILRB5O75023 590 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 ALDH1A2O94788 518 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 TMCC1O94876 653 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 MAP3K6O95382 1288 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 CCNCP24863 283 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 PTPN7P35236 360 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 SERPINB6P35237 376 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 GARSP41250 739 aaKnown RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 NRLP54845 237 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 GEMIN4P57678 1058 aaKnown RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 RPS14P62263 151 aaKnown RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 SLC10A7Q0GE19 358 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF211Q13398 564 aaPredicted RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 TFDP2Q14188 446 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 STARD3Q14849 445 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 RPS6KA1Q15418 735 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 ODF2Q5BJF6 829 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 CARD16Q5EG05 197 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 KAZNQ674X7 775 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 HEATR6Q6AI08 1181 aaKnown RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 ANO7Q6IWH7 933 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 C22orf39Q6P5X5 142 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 DPY19L3Q6ZPD9 716 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 CAPN12Q6ZSI9 719 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 WDR5BQ86VZ2 330 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms