RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TM9SF1O15321 606 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 SPAG7O75391 227 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 ZWINTO95229 277 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 PAPSS2O95340 614 aaPredicted RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 FAM107AO95990 144 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 CA4P22748 312 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 GBP2P32456 591 aaPredicted RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 RPA3P35244 121 aaPredicted RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 GP5P40197 560 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 CSKP41240 450 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 NUMBP49757 651 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 WDR4P57081 412 aaKnown RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 CDK18Q07002 472 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 NSUN2Q08J23 767 aaKnown RBP eCLIP15.37■□□□□ 0.05
ACTB-204ENST00000425660 KCNC3Q14003 757 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 KDELC2Q7Z4H8 507 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 GRASPQ7Z6J2 395 aaPredicted RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 KCNMB4Q86W47 210 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 RASSF3Q86WH2 238 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 CNTN4Q8IWV2 1026 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 ANKRD42Q8N9B4 389 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 ACDQ96AP0 544 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 TRIB3Q96RU7 358 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 NOD2Q9HC29 1040 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 MKS1Q9NXB0 559 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 IL1RAPL1Q9NZN1 696 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 VPS51Q9UID3 782 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 NOTCH4Q99466 2003 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 HELZP42694 1942 aaKnown RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 HEATR9A2RTY3 570 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 INSIG1O15503 277 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 SNAP91O60641 907 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 CCNFP41002 786 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 RGRP47804 291 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 ARCN1P48444 511 aaKnown RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 LRRC14Q15048 493 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 ZNF77Q15935 545 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 DUSP6Q16828 381 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 SIRPB2Q5JXA9 342 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 CKAP2Q8WWK9 683 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 CHMP6Q96FZ7 201 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 APOPT1Q96IL0 206 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 NUDCD1Q96RS6 583 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 C2orf49Q9BVC5 232 aaPredicted RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 SLC17A6Q9P2U8 582 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 DOCK6Q96HP0 2047 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 MROH6A6NGR9 719 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 SIN3BO75182 1162 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 TMCC1O94876 653 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 PRAMEF12O95522 483 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 CYBBP04839 570 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 FGF1P05230 155 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 PYGBP11216 843 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 ARNTP27540 789 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 PLK1P53350 603 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 NTHL1P78549 312 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 USP4Q13107 963 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 HSP90AA5PQ58FG0 334 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 GRTP1Q5TC63 336 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 MROH9Q5TGP6 573 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 KIAA0930Q6ICG6 404 aaPredicted RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 RBM23Q86U06 439 aaKnown RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 SLC25A41Q8N5S1 370 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 TTC16Q8NEE8 873 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 MGARPQ8TDB4 240 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 PEX13Q92968 403 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 ISL2Q96A47 359 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 LMLNQ96KR4 655 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 NSMCE3Q96MG7 304 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 CCT8L2Q96SF2 557 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 C20orf96Q9NUD7 363 aaPredicted RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 NSMCE4AQ9NXX6 385 aa15.36■□□□□ 0.05
ACTB-204ENST00000425660 KIAA1522Q9P206 1035 aaPredicted RBP15.36■□□□□ 0.05
ACTB-204ENST00000425660 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
ACTB-204ENST00000425660 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
ACTB-204ENST00000425660 GOLGA8RI6L899 631 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 PENKP01210 267 aaPredicted RBP15.35■□□□□ 0.05
ACTB-204ENST00000425660 ITGA2BP08514 1039 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 WEE1P30291 646 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 NEK3P51956 506 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 SLC12A1Q13621 1099 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 BMPR2Q13873 1038 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 RALGPS1Q5JS13 557 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 ZNF697Q5TEC3 545 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 RETSATQ6NUM9 610 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 ESRP1Q6NXG1 681 aaKnown RBP15.35■□□□□ 0.05
ACTB-204ENST00000425660 TPGS1Q6ZTW0 290 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 KIAA1958Q8N8K9 716 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 ACMSDQ8TDX5 336 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 DYDC1Q8WWB3 177 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 BHMTQ93088 406 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 IFT43Q96FT9 208 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 AGAP2Q99490 1192 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 KLF6Q99612 283 aaPredicted RBP15.35■□□□□ 0.05
ACTB-204ENST00000425660 RBBP8Q99708 897 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 TDRD1Q9BXT4 1180 aaKnown RBP15.35■□□□□ 0.05
ACTB-204ENST00000425660 TLE6Q9H808 572 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms