RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 PGBD5Q8N414 524 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 MREGQ8N565 214 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 ST13P5Q8NFI4 369 aaPredicted RBP10.46□□□□□ -0.73
MDC1-205ENST00000425072 SPATA22Q8NHS9 363 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 PYROXD1Q8WU10 500 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 TADA1Q96BN2 335 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 LRIG1Q96JA1 1093 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 RPL10LQ96L21 214 aaKnown RBP10.46□□□□□ -0.73
MDC1-205ENST00000425072 GDAP1L1Q96MZ0 367 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 SRPK1Q96SB4 655 aaKnown RBP10.46□□□□□ -0.73
MDC1-205ENST00000425072 P2RY13Q9BPV8 354 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 TBL1YQ9BQ87 522 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 CCDC77Q9BR77 488 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 FSD1LQ9BXM9 530 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 CPEB1Q9BZB8 566 aaKnown RBP10.46□□□□□ -0.73
MDC1-205ENST00000425072 ARNT2Q9HBZ2 717 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 NOD2Q9HC29 1040 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 STARD13Q9Y3M8 1113 aa10.46□□□□□ -0.73
MDC1-205ENST00000425072 LOC285095A0A1B0GVY8 99 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 TCRBV7S3A2A0A539 114 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 E7ESA3 106 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 GOLGA8MH3BSY2 632 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 ARNTLO00327 626 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 MT-CYBP00156 380 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 GSTA2P09210 222 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 FAM153BP0C7A2 387 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 ALADP13716 330 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 CR2P20023 1033 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 HLA-DPA1P20036 260 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 SP100P23497 879 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 NFKBIAP25963 317 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 OPRD1P41143 372 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 WNT3AP56704 352 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 MAXP61244 160 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 RPL26P61254 145 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 POLR2LP62875 67 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 SKOR1P84550 965 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 DSC2Q02487 901 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 CDK18Q07002 472 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 BCL2L1Q07817 233 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 NIPAL4Q0D2K0 466 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 PDIA2Q13087 525 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 GAB4Q2WGN9 574 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 BBS9Q3SYG4 887 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 FAM153CQ494X1 144 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 ALS2CLQ60I27 953 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 TMEM215Q68D42 235 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 FBXO38Q6PIJ6 1188 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 NCEH1Q6PIU2 408 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 CROCCP2Q86T23 111 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 CAND1Q86VP6 1230 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 RYBPQ8N488 228 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.45□□□□□ -0.74
MDC1-205ENST00000425072 TERB1Q8NA31 727 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 IPMKQ8NFU5 416 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 OR2AP1Q8NGE2 309 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 MAFAQ8NHW3 353 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 TTC8Q8TAM2 541 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 HCAR2Q8TDS4 363 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 OXNAD1Q96HP4 312 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 FEM1CQ96JP0 617 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 ZNF641Q96N77 438 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 SERPINB12Q96P63 405 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 TUBGCP5Q96RT8 1024 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 MLPHQ9BV36 600 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 IL22Q9GZX6 179 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 NEUROG2Q9H2A3 272 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 PABPC3Q9H361 631 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 ACBD3Q9H3P7 528 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 ATP13A3Q9H7F0 1226 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 SAYSD1Q9NPB0 183 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 CASS4Q9NQ75 786 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 UBP1Q9NZI7 540 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 HECAQ9UBI9 543 aaPredicted RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 SLCO3A1Q9UIG8 710 aa10.45□□□□□ -0.74
MDC1-205ENST00000425072 RPL26L1Q9UNX3 145 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 FCF1Q9Y324 198 aaKnown RBP10.45□□□□□ -0.74
MDC1-205ENST00000425072 LOC730098B7Z3J9 87 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 K7ERQ8 282 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 MAN2B1O00754 1011 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 MUSKO15146 869 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 SMAD6O43541 496 aaKnown RBP10.44□□□□□ -0.74
MDC1-205ENST00000425072 SPAG6O75602 509 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 TMEM63AO94886 807 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 TTC4O95801 387 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 NDST3O95803 873 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 AGTP01019 485 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 MMP2P08253 660 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 HNRNPLP14866 589 aaKnown RBP eCLIP10.44□□□□□ -0.74
MDC1-205ENST00000425072 DRD1P21728 446 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 ADRA1DP25100 572 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 SERPINA4P29622 427 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 PHBP35232 272 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 ADRA1AP35348 466 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 CTSOP43234 321 aaPredicted RBP10.44□□□□□ -0.74
MDC1-205ENST00000425072 GRSF1Q12849 480 aaKnown RBP eCLIP10.44□□□□□ -0.74
MDC1-205ENST00000425072 SPARCL1Q14515 664 aa10.44□□□□□ -0.74
MDC1-205ENST00000425072 KCTD19Q17RG1 926 aaPredicted RBP10.44□□□□□ -0.74
MDC1-205ENST00000425072 CCDC38Q502W7 563 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms