RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 RAD51Q06609 339 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 IL10RBQ08334 325 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 TCEAL1Q15170 157 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 SETMARQ53H47 684 aaPredicted RBP18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 FBXL19Q6PCT2 694 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 GDPD4Q6W3E5 623 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 MFSD2AQ8NA29 543 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 TMEM145Q8NBT3 493 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 KLHL32Q96NJ5 620 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 AASDHPPTQ9NRN7 309 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 TM7SF3Q9NS93 570 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 IPO11Q9UI26 975 aaKnown RBP18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 INTUQ9ULD6 942 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 PCDHGB2Q9Y5G2 931 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 CABIN1Q9Y6J0 2220 aa18.15■□□□□ 0.5
IGHV3-47-201ENST00000425060 PRAMEF26H0Y7S4 382 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 H0Y8X5 98 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 AREL1O15033 823 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 PEX11BO96011 259 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 RGRP47804 291 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 CSNK1DP48730 415 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 MMRN1Q13201 1228 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 DPYSL3Q14195 570 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 SEL1L3Q68CR1 1132 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 TMCO3Q6UWJ1 677 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 ADAT2Q7Z6V5 191 aaKnown RBP18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 RAB7BQ96AH8 199 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 EXOC2Q96KP1 924 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 SLC32A1Q9H598 525 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 DKK3Q9UBP4 350 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 TMEM131Q92545 1883 aa18.14■□□□□ 0.49
IGHV3-47-201ENST00000425060 TLR4O00206 839 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 MUSKO15146 869 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 SH3BP5O60239 455 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 BUB1BO60566 1050 aaPredicted RBP18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 CBFA2T3O75081 653 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 PALMO75781 387 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 PCDH8O95206 1070 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 LCA5LO95447 670 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 ARHGAP25P42331 645 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 SSR1P43307 286 aaKnown RBP18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 C21orf59P57076 290 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 NXPH1P58417 271 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 FGL2Q14314 439 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 KRT81Q14533 505 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 RFTN1Q14699 578 aaPredicted RBP18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 IQCHQ86VS3 1027 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 RHOT2Q8IXI1 618 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 TSEN2Q8NCE0 465 aaKnown RBP18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 HCAR2Q8TDS4 363 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 KLK6Q92876 244 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 SKA1Q96BD8 255 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 FEM1CQ96JP0 617 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 ZNF599Q96NL3 588 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 SP110Q9HB58 689 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 CA5BQ9Y2D0 317 aa18.13■□□□□ 0.49
IGHV3-47-201ENST00000425060 TRPM6Q9BX84 2022 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 A0A1B0GTQ1 180 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 TSPAN11A1L157 253 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 SLC31A1O15431 190 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 TSPAN6O43657 245 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 MAFKO60675 156 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 KRT7P08729 469 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 TIMP2P16035 220 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PRLRP16471 622 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 KCNA4P22459 653 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PMLP29590 882 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 RPS21P63220 83 aaKnown RBP18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 FAM193AP78312 1265 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 NSUN2Q08J23 767 aaKnown RBP eCLIP18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 OVGP1Q12889 678 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 MESDQ14696 234 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 GRM3Q14832 879 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PDK2Q15119 407 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 SHBQ15464 509 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 SLC45A4Q5BKX6 768 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PRAMEF14Q5SWL7 426 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 KIAA1161Q6NSJ0 714 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 SRLQ86TD4 932 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 SPATS2Q86XZ4 545 aaKnown RBP18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PCDH19Q8TAB3 1148 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 RFFLQ8WZ73 363 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 FAF2Q96CS3 445 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 NSMCE3Q96MG7 304 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 CAMK1GQ96NX5 476 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PSKH2Q96QS6 385 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 C1QTNF2Q9BXJ5 285 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 SUV39H2Q9H5I1 410 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 GGT7Q9UJ14 662 aa18.12■□□□□ 0.49
IGHV3-47-201ENST00000425060 PCDHGA12O60330 932 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 DFNA5O60443 496 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 PIGNO95427 931 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 FECHP22830 423 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 SERPINB6P35237 376 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 SLC10A7Q0GE19 358 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 HNRNPDQ14103 355 aaKnown RBP18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 STAT4Q14765 748 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 PAFAH1B3Q15102 231 aaKnown RBP18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 ANKRD20A8PQ5CZ79 823 aa18.11■□□□□ 0.49
IGHV3-47-201ENST00000425060 NCBP2-AS2Q69YL0 99 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms