RNA–Protein interactions for RNA: ENST00000424747.1

SLC52A1-202, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-202ENST00000424747 BHLHA9Q7RTU4 235 aa17.12■□□□□ 0.33
SLC52A1-202ENST00000424747 MRPL10Q7Z7H8 261 aaKnown RBP17.12■□□□□ 0.33
SLC52A1-202ENST00000424747 SMARCD1Q96GM5 515 aa17.12■□□□□ 0.33
SLC52A1-202ENST00000424747 CELF6Q96J87 481 aaKnown RBP17.12■□□□□ 0.33
SLC52A1-202ENST00000424747 ACOT9Q9Y305 439 aa17.12■□□□□ 0.33
SLC52A1-202ENST00000424747 COMMD3-BMI1R4GMX3 469 aa17.12■□□□□ 0.33
SLC52A1-202ENST00000424747 B3GAT3O94766 335 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 SMIM18P0DKX4 95 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 DPP6P42658 865 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 BRCC3P46736 316 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 UGP2Q16851 508 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 PKN3Q6P5Z2 889 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 PDCD6IPQ8WUM4 868 aaKnown RBP17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 MYLPFQ96A32 169 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 LRGUKQ96M69 825 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 GPR78Q96P69 363 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 TSGA13Q96PP4 275 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 RTP3Q9BQQ7 232 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 UPF3AQ9H1J1 476 aaKnown RBP17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 WDR41Q9HAD4 459 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 DNAJA2O60884 412 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 ENO3P13929 434 aaPredicted RBP17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 PKNOX1P55347 436 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 RAB10P61026 200 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 MS4A2Q01362 244 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 TSTD2Q5T7W7 516 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 PM20D1Q6GTS8 502 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 TICAM1Q8IUC6 712 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 HASPINQ8TF76 798 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 NAT14Q8WUY8 206 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 MARK4Q96L34 752 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 EPB41L1Q9H4G0 881 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 RAB26Q9ULW5 256 aa17.11■□□□□ 0.33
SLC52A1-202ENST00000424747 CFLARO15519 480 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 RTN3O95197 1032 aaPredicted RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ASGR1P07306 291 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 SRGAP2BP0DMP2 458 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ODC1P11926 461 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ME2P23368 584 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 POLD2P49005 469 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 FLT3LGP49771 235 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 COG7P83436 770 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 MPP1Q00013 466 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ZNF33AQ06730 810 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ZNF460Q14592 562 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 DCLRE1AQ6PJP8 1040 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 MFSD6LQ8IWD5 586 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 DENND6AQ8IWF6 608 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 KDM1BQ8NB78 822 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 CATSPER1Q8NEC5 780 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 SPATA22Q8NHS9 363 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 DLG3Q92796 817 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 USP13Q92995 863 aaPredicted RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 NXNL1Q96CM4 212 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 Q9H521 79 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 EFCAB1Q9HAE3 211 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 AAR2Q9Y312 384 aaKnown RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 COPG1Q9Y678 874 aaKnown RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 COL4A4P53420 1690 aaPredicted RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 FAM95CA0A1B0GW59 222 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 BDNFP23560 247 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 PMLP29590 882 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 MSX2P35548 267 aaPredicted RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 FCGRTP55899 365 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 CNGA3Q16281 694 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 SATL1Q86VE3 508 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 METTL23Q86XA0 190 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 BHLHE22Q8NFJ8 381 aaPredicted RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 ADCY4Q8NFM4 1077 aa17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 MAELQ96JY0 434 aaKnown RBP17.1■□□□□ 0.33
SLC52A1-202ENST00000424747 SEPT4O43236 478 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 NPHS1O60500 1241 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 STMN1P16949 149 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 CTBP1Q13363 440 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 ART3Q13508 389 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 KCNA10Q16322 511 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 UBAP1Q9NZ09 502 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 NDUFA13Q9P0J0 144 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 TCAF2A6NFQ2 919 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 ZNF623O75123 536 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 VAPBO95292 243 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 CRTAMO95727 393 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 MT-CYBP00156 380 aaPredicted RBP17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 ETS2P15036 469 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 ARCN1P48444 511 aaKnown RBP17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 SREBF2Q12772 1141 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 LSAMPQ13449 338 aa17.09■□□□□ 0.33
SLC52A1-202ENST00000424747 POU6F1Q14863 301 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms