RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CCDC70Q6NSX1 233 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 STK40Q8N2I9 435 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 AGGF1Q8N302 714 aaeCLIP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 MPP5Q8N3R9 675 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 TXNDC5Q8NBS9 432 aaKnown RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 IMP4Q96G21 291 aaKnown RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 SARDHQ9UL12 918 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 PIAS1O75925 651 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 UGT2B4P06133 528 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 SLC8A1P32418 973 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 KIR2DL1P43626 348 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 WNT3AP56704 352 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 ST8SIA6P61647 398 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 SKOR1P84550 965 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 KCNJ11Q14654 390 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 PARP6Q2NL67 630 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 TMEM196Q5HYL7 178 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 RALGPS2Q86X27 583 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 ZSWIM9Q86XI8 627 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 KIAA1958Q8N8K9 716 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 RPLP0P6Q8NHW5 317 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 PRCCQ92733 491 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 MRGPRX2Q96LB1 330 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 RETREG1Q9H6L5 497 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 TRHDEQ9UKU6 1024 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 C19orf67A6NJJ6 358 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 MTSS1O43312 755 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 BUD23O43709 281 aaKnown RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 HNRNPLP14866 589 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 CR2P20023 1033 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 INO80DQ53TQ3 878 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 ANKMY2Q8IV38 441 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 NAT8LQ8N9F0 302 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 OR2AP1Q8NGE2 309 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 ATXN2LQ8WWM7 1075 aaKnown RBP13.6□□□□□ -0.23
PRPF39-202ENST00000424478 ZNF599Q96NL3 588 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 ZDHHC18Q9NUE0 388 aa13.6□□□□□ -0.23
PRPF39-202ENST00000424478 KLF8O95600 359 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 CTPS1P17812 591 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 CALCOCO2Q13137 446 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 GLE1Q53GS7 698 aaKnown RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 ARSIQ5FYB1 569 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 TMEM31Q5JXX7 168 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 ZNF534Q76KX8 674 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 IL17RCQ8NAC3 791 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 WFIKKN2Q8TEU8 576 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 DNASE1L2Q92874 299 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 RUNDC3BQ96NL0 473 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 SLC25A51Q9H1U9 297 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 CD93Q9NPY3 652 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 SLC2A4RGQ9NR83 387 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 PCDHB9Q9Y5E1 797 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 CTIFO43310 598 aaKnown RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 ADAM23O75077 832 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 COL9A1P20849 921 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 PFKPQ01813 784 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 GRSF1Q12849 480 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 ITPRIPL1Q6GPH6 555 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 HIBCHQ6NVY1 386 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 CES3Q6UWW8 571 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 SRLQ86TD4 932 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 LRRC45Q96CN5 670 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 FCRL5Q96RD9 977 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 VAT1Q99536 393 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 PRKAG3Q9UGI9 489 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 RAI2Q9Y5P3 530 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 TECTAO75443 2155 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 LEFTY1O75610 366 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 NNMTP40261 264 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 DMC1Q14565 340 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 PTPRCAPQ14761 206 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 CERCAMQ5T4B2 595 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 MMAAQ8IVH4 418 aaKnown RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 PPIL6Q8IXY8 311 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 IFT20Q8IY31 132 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 BBS5Q8N3I7 341 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 UHMK1Q8TAS1 419 aaKnown RBP13.59□□□□□ -0.23
PRPF39-202ENST00000424478 TMEM245Q9H330 911 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 IL1RAPL1Q9NZN1 696 aa13.59□□□□□ -0.23
PRPF39-202ENST00000424478 ATP9BO43861 1147 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 ALPIP09923 528 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 EIF2DP41214 584 aaKnown RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 CARD16Q5EG05 197 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 KDELC1Q6UW63 502 aa13.58□□□□□ -0.24
PRPF39-202ENST00000424478 SYDE1Q6ZW31 735 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 CAND1Q86VP6 1230 aaKnown RBP13.58□□□□□ -0.24
PRPF39-202ENST00000424478 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.58□□□□□ -0.247e-10■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms