RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 AQP12AQ8IXF9 295 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 BBS5Q8N3I7 341 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 GALNT4Q8N4A0 578 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 TRIML2Q8N7C3 387 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 B3GALNT2Q8NCR0 500 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 C2CD4AQ8NCU7 369 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 TNIP2Q8NFZ5 429 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 GABPB2Q8TAK5 448 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-204ENST00000424143 FAM149B1Q96BN6 582 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 C16orf70Q9BSU1 422 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CEP41Q9BYV8 373 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 TRPC7Q9HCX4 862 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 CNGB3Q9NQW8 809 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 XPR1Q9UBH6 696 aa15.39■□□□□ 0.05
C9orf3-204ENST00000424143 A0A087WXM4 84 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 PSMD12O00232 456 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 HUS1O60921 280 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 CLASP2O75122 1294 aaKnown RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 STAMBPO95630 424 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 PGK1P00558 417 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 SNRPB2P08579 225 aaKnown RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 RBP1P09455 135 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 PAMP19021 973 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 CCNCP24863 283 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 LMO2P25791 158 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 CCNA1P78396 465 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 NHSL2Q5HYW2 709 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 TMEM198Q66K66 360 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 REP15Q6BDI9 236 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 KIAA0930Q6ICG6 404 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 DCLRE1AQ6PJP8 1040 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 AMIGO2Q86SJ2 522 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 LPGAT1Q92604 370 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 TFAP2CQ92754 450 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 ATP6V1E2Q96A05 226 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 SLCO4A1Q96BD0 722 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 RMND5BQ96G75 393 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 ATXN7L3BQ96GX2 97 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 RANBP9Q96S59 729 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 NPAS2Q99743 824 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 APBA2Q99767 749 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 YTHDF1Q9BYJ9 559 aaKnown RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 TRIM15Q9C019 465 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 OSBPL2Q9H1P3 480 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 MUC13Q9H3R2 512 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 PLGRKTQ9HBL7 147 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 DNAAF2Q9NVR5 837 aaKnown RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 ADA2Q9NZK5 511 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 LMCD1Q9NZU5 365 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 CROTQ9UKG9 612 aa15.38■□□□□ 0.05
C9orf3-204ENST00000424143 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
C9orf3-204ENST00000424143 FAM95CA0A1B0GW59 222 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 E2F8A0AVK6 867 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 E7ENX8 843 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 UBDO15205 165 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 HNRNPRO43390 633 aaKnown RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 HTRA2O43464 458 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 USP12O75317 370 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 FYNP06241 537 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 PGK2P07205 417 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 PDGFRBP09619 1106 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 TKTP29401 623 aaKnown RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 CD151P48509 253 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 CXCR3P49682 368 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 DAOAP59103 153 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 GK3PQ14409 553 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 LPIN1Q14693 890 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 ZBED5Q49AG3 693 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 COQ5Q5HYK3 327 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 RAB41Q5JT25 222 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 RWDD4Q6NW29 188 aaKnown RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 TRIM67Q6ZTA4 783 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 BEND5Q7L4P6 421 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 ERMP1Q7Z2K6 904 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 ANKRD13AQ8IZ07 590 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 SIX6OS1Q8N1H7 587 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 SCML4Q8N228 414 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 TMA16Q96EY4 203 aaKnown RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 CNDP2Q96KP4 475 aaKnown RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 HOPXQ9BPY8 73 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 LPIN3Q9BQK8 851 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 CCM2LQ9NUG4 571 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-204ENST00000424143 RBPJLQ9UBG7 517 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 PACSIN3Q9UKS6 424 aa15.37■□□□□ 0.05
C9orf3-204ENST00000424143 MCM3APO60318 1980 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TRIM64BA6NI03 449 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 KCNU1A8MYU2 1149 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 STX16-NPEPL1H3BU86 382 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 FBP2O00757 339 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 GABRDO14764 452 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PHGDHO43175 533 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 NRP2O60462 931 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 JUNP05412 331 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PTPN1P18031 435 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms