RNA–Protein interactions for RNA: ENST00000423879.5

AL359853.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL359853.3, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359853.3-201ENST00000423879 TLE1Q04724 770 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 ZBTB16Q05516 673 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 DRAP1Q14919 205 aaPredicted RBP5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 TGIF1Q15583 401 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 CDKN3Q16667 212 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 ISXQ2M1V0 245 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 SFMBT2Q5VUG0 894 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 RNF219Q5W0B1 726 aaPredicted RBP5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 NAPEPLDQ6IQ20 393 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 MMS22LQ6ZRQ5 1243 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 USP30Q70CQ3 517 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 KANSL1Q7Z3B3 1105 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 CDH24Q86UP0 819 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 ZDHHC13Q8IUH4 622 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 MFN1Q8IWA4 741 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 SLC25A45Q8N413 288 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 AADATQ8N5Z0 425 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 IFI44Q8TCB0 444 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 PLEKHO2Q8TD55 490 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 RNF139Q8WU17 664 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 RFFLQ8WZ73 363 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 PRR11Q96HE9 360 aaPredicted RBP5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 TRIM55Q9BYV6 548 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 XYLT2Q9H1B5 865 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 RSPH9Q9H1X1 276 aaPredicted RBP5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 FZD3Q9NPG1 666 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 AGPAT3Q9NRZ7 376 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 PRR13Q9NZ81 148 aa5.48□□□□□ -1.53
AL359853.3-201ENST00000423879 SPTA1P02549 2419 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 A0A087X0B3 334 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 BLACEA4D250 179 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 VPS37CA5D8V6 355 aaPredicted RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 TGFB1I1O43294 461 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 MAGEC1O60732 1142 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 GJB6O95452 261 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 VNN1O95497 513 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 C4BPAP04003 597 aaKnown RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ALPPL2P10696 532 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 GP1BBP13224 206 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 VAV1P15498 845 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ZNF18P17022 549 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 GOT1P17174 413 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 DGKAP23743 735 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CASP1P29466 404 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SLC6A4P31645 630 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CSKP41240 450 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 STK19P49842 368 aaPredicted RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CCR5P51681 352 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ZNF143P52747 638 aaPredicted RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CLDN2P57739 230 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CYP4F2P78329 520 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 DLG4P78352 724 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 IGFBP7Q16270 282 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 BMT2Q1RMZ1 405 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ACCSLQ4AC99 568 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ANKRD39Q53RE8 183 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 OR6B2Q6IFH4 312 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 FAM173BQ6P4H8 233 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 KLHDC10Q6PID8 442 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CCDC73Q6ZRK6 1079 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 EFL1Q7Z2Z2 1120 aaKnown RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CCDC186Q7Z3E2 898 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 VASH2Q86V25 355 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CCDC117Q8IWD4 279 aaPredicted RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CRYBG2Q8N1P7 616 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CFAP52Q8N1V2 620 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 OR4C6Q8NH72 309 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 HEXIM2Q96MH2 286 aaKnown RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CCNL2Q96S94 520 aaPredicted RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 DUSP16Q9BY84 665 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ULBP1Q9BZM6 244 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 TNKS2Q9H2K2 1166 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ERVMER34-1Q9H9K5 563 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 EPB41L5Q9HCM4 733 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SLC39A2Q9NP94 309 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 DNAJC28Q9NX36 388 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 CLIC5Q9NZA1 410 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SLCO3A1Q9UIG8 710 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SCML1Q9UN30 329 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SRPK3Q9UPE1 567 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 SMC3Q9UQE7 1217 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ERVW-1Q9UQF0 538 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 ENTPD2Q9Y5L3 495 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 MED13Q9UHV7 2174 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 UBE4BO95155 1302 aa5.47□□□□□ -1.53
AL359853.3-201ENST00000423879 EDDM13A0A1B0GTR0 161 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 A0A1W2PNU3 283 aaPredicted RBP5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 FRMD3A2A2Y4 597 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 TYW5A2RUC4 315 aaKnown RBP5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 MUSKO15146 869 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 SPTLC2O15270 562 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 SUV39H1O43463 412 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 PIAS2O75928 621 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 MOCS3O95396 460 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 BMP15O95972 392 aa5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 MOCS2O96007 188 aaPredicted RBP5.46□□□□□ -1.54
AL359853.3-201ENST00000423879 HLA-DRAP01903 254 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms