RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 BCCIPQ9P287 314 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 PPM1HQ9ULR3 514 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 WASF2Q9Y6W5 498 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 TTC24A2A3L6 582 aaPredicted RBP17.75■□□□□ 0.43
LINC00271-201ENST00000421378 C1QTNF3-AMACRE9PGA6 284 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 LAMTOR5O43504 91 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 APBB3O95704 486 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 GABRG2P18507 467 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 CD68P34810 354 aaPredicted RBP17.75■□□□□ 0.43
LINC00271-201ENST00000421378 ACTN2P35609 894 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 PSMD8P48556 350 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 ARSIQ5FYB1 569 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 TMIEQ8NEW7 156 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 SPATA4Q8NEY3 305 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 MDGA1Q8NFP4 955 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 ATL2Q8NHH9 583 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 PRCCQ92733 491 aaPredicted RBP17.75■□□□□ 0.43
LINC00271-201ENST00000421378 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 OSBPL1AQ9BXW6 950 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 CPEB1Q9BZB8 566 aaKnown RBP17.75■□□□□ 0.43
LINC00271-201ENST00000421378 SLC25A51Q9H1U9 297 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 SLC6A17Q9H1V8 727 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 GBA3Q9H227 469 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 ATP13A3Q9H7F0 1226 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 GLOD4Q9HC38 313 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 PRMT8Q9NR22 394 aaPredicted RBP17.75■□□□□ 0.43
LINC00271-201ENST00000421378 RSPH14Q9UHP6 348 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 CUL9Q8IWT3 2517 aa17.75■□□□□ 0.43
LINC00271-201ENST00000421378 GCATO75600 419 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 ADH1BP00325 375 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 UGT2B4P06133 528 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 NFKB1P19838 968 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 RPS14P62263 151 aaKnown RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 CST6Q15828 149 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 FAM46CQ5VWP2 391 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 NCEH1Q6PIU2 408 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 ARHGEF18Q6ZSZ5 1173 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 PGBD3Q8N328 593 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 ARRDC2Q8TBH0 407 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 PIP4K2CQ8TBX8 421 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 GRK7Q8WTQ7 553 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 VOPP1Q96AW1 172 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 SIPA1Q96FS4 1042 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 FEZ2Q9UHY8 353 aaPredicted RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 SARDHQ9UL12 918 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 KMT2EQ8IZD2 1858 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 K7ESF4 209 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 KPNA3O00505 521 aaPredicted RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 PIGNO95427 931 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 DNTTP04053 509 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 SERPINF2P08697 491 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 SERPINA4P29622 427 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 CD86P42081 329 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 ZBTB16Q05516 673 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 BCL2L1Q07817 233 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 NIPAL4Q0D2K0 466 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 POM121L1PQ3SYA9 428 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 KIAA1324Q6UXG2 1013 aaKnown RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 ZNF572Q7Z3I7 529 aaPredicted RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 RASSF3Q86WH2 238 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 KLHL7Q8IXQ5 586 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 IMP4Q96G21 291 aaKnown RBP17.74■□□□□ 0.43
LINC00271-201ENST00000421378 PPP1R16AQ96I34 528 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 SCML1Q9UN30 329 aa17.74■□□□□ 0.43
LINC00271-201ENST00000421378 F5H423 210 aaPredicted RBP17.73■□□□□ 0.43
LINC00271-201ENST00000421378 MID1O15344 667 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 ECEL1O95672 775 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 GAS8O95995 478 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 C7P10643 843 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 ACADMP11310 421 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 C5AR1P21730 350 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 SLC8A1P32418 973 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 TTC31Q49AM3 519 aaPredicted RBP17.73■□□□□ 0.43
LINC00271-201ENST00000421378 GDPD4Q6W3E5 623 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 CAMK1DQ8IU85 385 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 GLIS1Q8NBF1 620 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 ZNF641Q96N77 438 aaPredicted RBP17.73■□□□□ 0.43
LINC00271-201ENST00000421378 RUNDC3BQ96NL0 473 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 FCRL5Q96RD9 977 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 RBM15Q96T37 977 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00271-201ENST00000421378 PCYOX1Q9UHG3 505 aa17.73■□□□□ 0.43
LINC00271-201ENST00000421378 ANKRD36A6QL64 1941 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 SOCS5O75159 536 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 MT-CYBP00156 380 aaPredicted RBP17.72■□□□□ 0.43
LINC00271-201ENST00000421378 MMP2P08253 660 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 ETS1P14921 441 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PSMB4P28070 264 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PXNP49023 591 aaPredicted RBP17.72■□□□□ 0.43
LINC00271-201ENST00000421378 METAP1P53582 386 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 C2orf54Q08AI8 447 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 ZNF805Q5CZA5 627 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 CFAP58Q5T655 872 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 TSSK4Q6SA08 328 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PRUNE1Q86TP1 453 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PRPF39Q86UA1 669 aaKnown RBP17.72■□□□□ 0.43
LINC00271-201ENST00000421378 SPATA22Q8NHS9 363 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 NSMCE3Q96MG7 304 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 KLHL32Q96NJ5 620 aa17.72■□□□□ 0.43
LINC00271-201ENST00000421378 PPP1R2P1Q96PQ5 205 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms