RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SPIDRQ14159 915 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 PMF1Q6P1K2 205 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 FAM151BQ6UXP7 276 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 NKAPQ8N5F7 415 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 OR52K1Q8NGK4 314 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CPXM1Q96SM3 734 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 SNX5Q9Y5X3 404 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 LRRC10BA6NIK2 292 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 UBXN8O00124 270 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 AGRPO00253 132 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 AIM2O14862 343 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 USP12O75317 370 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 UGT2B4P06133 528 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 FOSL2P15408 326 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GNA12Q03113 381 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 STXBP5Q5T5C0 1151 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 MFSD5Q6N075 450 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 VITQ6UXI7 678 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GRASPQ7Z6J2 395 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 SLC44A2Q8IWA5 706 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 HMGB4Q8WW32 186 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 WRAP53Q9BUR4 548 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 EIF4E1BA6NMX2 242 aaKnown RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 AVILO75366 819 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ITGAXP20702 1163 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 NDST2P52849 883 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CDCA2Q69YH5 1023 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 TAF8Q7Z7C8 310 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 AUTS2Q8WXX7 1259 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 MBOAT7Q96N66 472 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 VPS4BO75351 444 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 IFNA14P01570 189 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GRK2P25098 689 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ACTN3Q08043 901 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-206ENST00000421141 C2orf27AQ580R0 203 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 CYP4Z1Q86W10 505 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 OR10G6Q8NH81 332 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ABCB8Q9NUT2 735 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 GGT7Q9UJ14 662 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 L1RE1Q9UN81 338 aa10.84□□□□□ -0.67
PTCH1-206ENST00000421141 ENPP3O14638 875 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 LMO2P25791 158 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 MDH1P40925 334 aaKnown RBP10.83□□□□□ -0.67
PTCH1-206ENST00000421141 C1QTNF8P60827 252 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 RFWD3Q6PCD5 774 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 XYLT1Q86Y38 959 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 NECTIN4Q96NY8 510 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 PRDM12Q9H4Q4 367 aa10.83□□□□□ -0.67
PTCH1-206ENST00000421141 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.83□□□□□ -0.67
PTCH1-206ENST00000421141 NUP205Q92621 2012 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 CCDC189A1A4V9 331 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 RGS14O43566 566 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 PTPN9P43378 593 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 NAA20P61599 178 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 GUCY1A3Q02108 690 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 SNAP47Q5SQN1 464 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 CES3Q6UWW8 571 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 PHC3Q8NDX5 983 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 STAG3L4Q8TBR4 150 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 KCTD13Q8WZ19 329 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 HGH1Q9BTY7 390 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 DPEP3Q9H4B8 488 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ETNK1Q9HBU6 452 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 SNX6Q9UNH7 406 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 CFIP05156 583 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 CPA3P15088 417 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 RPIAP49247 311 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ALDH6A1Q02252 535 aaKnown RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 DMC1Q14565 340 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 USP7Q93009 1102 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 CEP19Q96LK0 163 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 EXO5Q9H790 373 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ATG2BQ96BY7 2078 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 NFKB1P19838 968 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ADRA1BP35368 520 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 TIE1P35590 1138 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 PGM1P36871 562 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 TMEM192Q8IY95 271 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 SLC4A11Q8NBS3 891 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 NDRG1Q92597 394 aaKnown RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 KCNK16Q96T55 309 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 SHCBP1LQ9BZQ2 653 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 EPN3Q9H201 632 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 USP15Q9Y4E8 981 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 THSD7AQ9UPZ6 1657 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 CD3EAPO15446 510 aaKnown RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 VIPP01282 170 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ECT2LQ008S8 904 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 SUZ12Q15022 739 aaKnown RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 GPR135Q8IZ08 494 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 OR4L1Q8NH43 312 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 SCHIP1Q9P0W5 487 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-206ENST00000421141 MAPRE3Q9UPY8 281 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 ASF1AQ9Y294 204 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 DNAJC16Q9Y2G8 782 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 RHPN2P1A8MT19 583 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 BTNL10A8MVZ5 291 aa10.83□□□□□ -0.68
PTCH1-206ENST00000421141 OR10H2O60403 315 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms