RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 IRAK2O43187 625 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TSPAN3O60637 253 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 HSF2BPO75031 334 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 RPP40O75818 363 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 GFPT2O94808 682 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 LSM8O95777 96 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TRUB2O95900 331 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 GLI1P08151 1106 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 HOXB2P14652 356 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 CDK11BP21127 795 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 HOXD9P28356 352 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SLC6A4P31645 630 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 MASP1P48740 699 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SLC11A2P49281 568 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SGSHP51688 502 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 DGKEP52429 567 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SNX16P57768 344 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 PITX1P78337 314 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 KCNAB2Q13303 367 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TAF5Q15542 800 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 LPAL2Q16609 132 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 GEN1Q17RS7 908 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 MPPE1Q53F39 396 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TM4SF20Q53R12 229 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 FAM133BQ5BKY9 247 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 EFHC1Q5JVL4 640 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 ADGRF1Q5T601 910 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TAF3Q5VWG9 929 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 NADSYN1Q6IA69 706 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 RFWD3Q6PCD5 774 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 CYP2R1Q6VVX0 501 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TRMT11Q7Z4G4 463 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 ANKS1BQ7Z6G8 1248 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 UNC45BQ8IWX7 931 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 DHX40Q8IX18 779 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 DEFB106AQ8N104 65 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 DCLK2Q8N568 766 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TMEM35BQ8NCS4 154 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 MDGA1Q8NFP4 955 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 GAB3Q8WWW8 586 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SLC39A13Q96H72 371 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 PRICKLE1Q96MT3 831 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 ALPK1Q96QP1 1244 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 ERGIC2Q96RQ1 377 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SLC2A11Q9BYW1 496 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TPSD1Q9BZJ3 242 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 PDCL3Q9H2J4 239 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 FAM204AQ9H8W3 233 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 NLRC4Q9NPP4 1024 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 RAB23Q9ULC3 237 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 CLEC4EQ9ULY5 219 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 PRKAB1Q9Y478 270 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 DAAM1Q9Y4D1 1078 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 MYO18AQ92614 2054 aaKnown RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 SPAG17Q6Q759 2223 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TCRBV21S2A2A0A5A6 115 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 FAM170AA1A519 330 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 SYCE3A1L190 88 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 LRRC10BA6NIK2 292 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ACSL4O60488 711 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 DNAJC6O75061 913 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 DAB1O75553 588 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 GRAP2O75791 330 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 DNAJC8O75937 253 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ALDH1A2O94788 518 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 RASGRP1O95267 797 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 CRTAMO95727 393 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 MOCS2O96007 188 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 APOEP02649 317 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 MMEP08473 750 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 NTSR1P30989 418 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 SOX5P35711 763 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 STAT1P42224 750 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 WASP42768 502 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 NOMO3P69849 1222 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 CDR2Q01850 454 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 SLC6A3Q01959 620 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 UBXN1Q04323 297 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 EIF4EBP2Q13542 120 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 DCAF6Q58WW2 860 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 OTUD1Q5VV17 481 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 NAA35Q5VZE5 725 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 LAIR1Q6GTX8 287 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 OR6B2Q6IFH4 312 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 CEP68Q76N32 757 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 SLC26A9Q7LBE3 791 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 CACNA2D4Q7Z3S7 1137 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ZNF677Q86XU0 584 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 XYLT1Q86Y38 959 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ZDHHC17Q8IUH5 632 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 CHPFQ8IZ52 775 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 HJURPQ8NCD3 748 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 RCBTB1Q8NDN9 531 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ZNF397Q8NF99 534 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 NEK11Q8NG66 645 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 SLC20A1Q8WUM9 679 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 AZIN2Q96A70 460 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms