RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TBC1D22AQ8WUA7 517 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 SH3KBP1Q96B97 665 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 GFM1Q96RP9 751 aaKnown RBP4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 CD180Q99467 661 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 HEMGNQ9BXL5 484 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 CTNNAL1Q9UBT7 734 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 SUFUQ9UMX1 484 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 LRP12Q9Y561 859 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 HSPB2A8KAH6 182 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 LACTBL1A8MY62 500 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 KDM4EB2RXH2 506 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 EYA2O00167 538 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 VWA5AO00534 786 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 EBAG9O00559 213 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 HOXC6P09630 235 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZNF12P17014 697 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 NAGAP17050 411 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 SRD5A1P18405 259 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 TKTP29401 623 aaKnown RBP4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 GGT5P36269 586 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 TUBP50607 506 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZXDBP98169 803 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZRSR2Q15696 482 aaKnown RBP4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 HSPB2Q16082 182 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 NFIL3Q16649 462 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZNF766Q5HY98 468 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 SLC22A25Q6T423 547 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 MON1BQ7L1V2 547 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZNF354CQ86Y25 554 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 HTRA1Q92743 480 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 SNTG1Q9NSN8 517 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 HIF1ANQ9NWT6 349 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 HSPB7Q9UBY9 170 aa4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 SRPRBQ9Y5M8 271 aaKnown RBP4.66□□□□□ -1.66
HMGB1P49-201ENST00000418882 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 CHL1O00533 1208 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 PGM1P36871 562 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 BLKP51451 505 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 NUDT6P53370 316 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 TLE2Q04725 743 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 GALNT2Q10471 571 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 EDRF1Q3B7T1 1238 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 PLEKHO1Q53GL0 409 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 SLC9C2Q5TAH2 1124 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 RBM23Q86U06 439 aaKnown RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 FAM160B2Q86V87 743 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 SPATA2LQ8IUW3 424 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 LURAP1LQ8IV03 231 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 DENND6AQ8IWF6 608 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 IQCF1Q8N6M8 205 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 ARRDC2Q8TBH0 407 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 ELP5Q8TE02 316 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 USP13Q92995 863 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 RNF183Q96D59 192 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 PHF21BQ96EK2 531 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 NTPCRQ9BSD7 190 aaKnown RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 TMEM204Q9BSN7 226 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 SPATS2LQ9NUQ6 558 aaKnown RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 IFT80Q9P2H3 777 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 SLC25A10Q9UBX3 287 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 GJD2Q9UKL4 321 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 PCDHGB5Q9Y5G0 923 aa4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 LRRFIP2Q9Y608 721 aaKnown RBP4.65□□□□□ -1.67
HMGB1P49-201ENST00000418882 A0A0U1RQF3 1178 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ARHGAP10A1A4S6 786 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 C4orf47A7E2U8 309 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 TEX22C9J3V5 150 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 HOXC11O43248 304 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ITM2AO43736 263 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ATP2C2O75185 946 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ITGAXP20702 1163 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 CCKBRP32239 447 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 PSMC2P35998 433 aaKnown RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 LIFRP42702 1097 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 AMTP48728 403 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 MXI1P50539 228 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ADORA2A-AS1P86434 159 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 EFNB1P98172 346 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 CYP4A11Q02928 519 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ESCO2Q56NI9 601 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 TDRD12Q587J7 1177 aaKnown RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 PRAMEF19Q5SWL8 479 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 LRRC8EQ6NSJ5 796 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 C8orf82Q6P1X6 216 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 LRRC8DQ7L1W4 858 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 PATL1Q86TB9 770 aaKnown RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 NOXA1Q86UR1 476 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 HEATR4Q86WZ0 1026 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 PALB2Q86YC2 1186 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 MB21D2Q8IYB1 491 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 CLIP4Q8N3C7 705 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 ZMIZ2Q8NF64 920 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 THOC3Q96J01 351 aaKnown RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 MPHOSPH8Q99549 860 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 FUZQ9BT04 418 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 NUF2Q9BZD4 464 aa4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 GLIS2Q9BZE0 524 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 INTS2Q9H0H0 1204 aaKnown RBP4.64□□□□□ -1.67
HMGB1P49-201ENST00000418882 CDT1Q9H211 546 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms