RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CHI3L2Q15782 390 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 SIRPB2Q5JXA9 342 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 CXorf57Q6NSI4 855 aaKnown RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 RFWD3Q6PCD5 774 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 LILRA6Q6PI73 481 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 CCDC91Q7Z6B0 441 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 NECAB2Q7Z6G3 386 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 TMC8Q8IU68 726 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 DENND1CQ8IV53 801 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 NUDCD3Q8IVD9 361 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 HERC6Q8IVU3 1022 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 C10orf67Q8IYJ2 551 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 BBS5Q8N3I7 341 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 OR7D4Q8NG98 312 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 OR52K2Q8NGK3 314 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 RDH11Q8TC12 318 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 CALML6Q8TD86 181 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 SP7Q8TDD2 431 aaPredicted RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 WBP2Q969T9 261 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 SIKE1Q9BRV8 207 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 MECRQ9BV79 373 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 C1QTNF1Q9BXJ1 281 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 RNF38Q9H0F5 515 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 MFSD1Q9H3U5 465 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 KCNK13Q9HB14 408 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 THAP1Q9NVV9 213 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 COPG2Q9UBF2 871 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC2A6Q9UGQ3 507 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 GGT7Q9UJ14 662 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 MID2Q9UJV3 735 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 AGO1Q9UL18 857 aaKnown RBP9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 CAPN7Q9Y6W3 813 aa9.15□□□□□ -0.94
LINCMD1-201ENST00000418518 A0A096LPK6 155 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 A0A0D9SEW6 157 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CXorf51AA0A1B0GTR3 108 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 C2orf78A6NCI8 922 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 PRRG1O14668 218 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 LDB2O43679 373 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 H2AFYO75367 372 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 ZMPSTE24O75844 475 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 RASSF9O75901 435 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 ATP5HO75947 161 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 FGF18O76093 207 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 VAPBO95292 243 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 NDST3O95803 873 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 AHSGP02765 367 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SERPINE1P05121 402 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 C2P06681 752 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 APOA4P06727 396 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 RHOCP08134 193 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 HSPA8P11142 646 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 GRK2P25098 689 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC1A2P43004 574 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 LEPRP48357 1165 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CD151P48509 253 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SGSHP51688 502 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CLCN5P51795 746 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 OXCT1P55809 520 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 MAXP61244 160 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SLC7A9P82251 487 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 TMPRSS15P98073 1019 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 GRM3Q14832 879 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SETDB1Q15047 1291 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CNGA3Q16281 694 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 TAF12Q16514 161 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 PABPC1LQ4VXU2 614 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 FASTKD1Q53R41 847 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 RALGPS1Q5JS13 557 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 RTL10Q7L3V2 364 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 TMCO2Q7Z6W1 182 aaPredicted RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 UBE2Q1Q7Z7E8 422 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CMC1Q7Z7K0 106 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CFAP52Q8N1V2 620 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 CPXM2Q8N436 756 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 HJURPQ8NCD3 748 aaPredicted RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 OR13J1Q8NGT2 312 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 RFWD2Q8NHY2 731 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 GABPB2Q8TAK5 448 aaPredicted RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SCG3Q8WXD2 468 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SKA1Q96BD8 255 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 YME1L1Q96TA2 773 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SEMA3CQ99985 751 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 NACA2Q9H009 215 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 MYLK2Q9H1R3 596 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 RASSF4Q9H2L5 321 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 STN1Q9H668 368 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 NPHS2Q9NP85 383 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 SAR1AQ9NR31 198 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 KCNK4Q9NYG8 393 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 TMEM216Q9P0N5 145 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 DNMT3BQ9UBC3 853 aaKnown RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 UBA2Q9UBT2 640 aaPredicted RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 LZTS1Q9Y250 596 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 PCDHB12Q9Y5F1 795 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 IRAK3Q9Y616 596 aa9.14□□□□□ -0.95
LINCMD1-201ENST00000418518 MYOFQ9NZM1 2061 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms