RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 BYSLQ13895 437 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 ETFDHQ16134 617 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 SMTNL2Q2TAL5 461 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 AP5B1Q2VPB7 878 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 TWISTNBQ3B726 338 aaPredicted RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 PLK5Q496M5 336 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 C6orf10Q5SRN2 563 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 ATG16L1Q676U5 607 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 BBS12Q6ZW61 710 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 B4GALNT4Q76KP1 1039 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 MRPL10Q7Z7H8 261 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 IGFN1Q86VF2 1251 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 CCDC25Q86WR0 208 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 CERS3Q8IU89 383 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 GPT2Q8TD30 523 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 NCSTNQ92542 709 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 STAMQ92783 540 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 VOPP1Q96AW1 172 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 EME1Q96AY2 570 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 RNFT2Q96EX2 444 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 MAELQ96JY0 434 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 WDR83Q9BRX9 315 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 TRMOQ9BU70 441 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 IFT27Q9BW83 186 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 FRMD8Q9BZ67 464 aaPredicted RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 CTDSP1Q9GZU7 261 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 SPRTNQ9H040 489 aaPredicted RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.86□□□□□ -1.95
VPS41-206ENST00000418457 IL21RQ9HBE5 538 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 ZNF304Q9HCX3 659 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 TLR8Q9NR97 1041 aaKnown RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 UPB1Q9UBR1 384 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 CD207Q9UJ71 328 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 DHDHQ9UQ10 334 aa2.86□□□□□ -1.95
VPS41-206ENST00000418457 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 SOS1Q07889 1333 aaPredicted RBP2.86□□□□□ -1.95
VPS41-206ENST00000418457 PREX1Q8TCU6 1659 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 EDC4Q6P2E9 1401 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 POGZQ7Z3K3 1410 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 YTHDC2Q9H6S0 1430 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 PXDNLA1KZ92 1463 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 CD163L1Q9NR16 1453 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 AKAP12Q02952 1782 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 CCDC189A1A4V9 331 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 TLX3O43711 291 aaPredicted RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 HBP1O60381 514 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 CAVIN2O95810 425 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 TMEM191BP0C7N4 346 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 PRF1P14222 555 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 MX1P20591 662 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 GJC1P36383 396 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 SKIV2L2P42285 1042 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 CCT4P50991 539 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 UBE2HP62256 183 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 GAD2Q05329 585 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 GABPB1Q06547 395 aaPredicted RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 TBL3Q12788 808 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 IL13RA2Q14627 380 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 WDR45BQ5MNZ6 344 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 ENTPD8Q5MY95 495 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 SH2D4BQ5SQS7 431 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 PIK3CD-AS1Q5SR53 167 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 TMEM268Q5VZI3 342 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 AAGABQ6PD74 315 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 FAM185AQ8N0U4 392 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 AFAP1Q8N556 730 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 DPP10Q8N608 796 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 ARFGAP1Q8N6T3 406 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 SCAIQ8N9R8 606 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 MPLKIPQ8TAP9 179 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 CENPIQ92674 756 aaPredicted RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 SH3KBP1Q96B97 665 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 ZNF419Q96HQ0 510 aaPredicted RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 FRG2BQ96QU4 278 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 TMEM79Q9BSE2 394 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 HIPK3Q9H422 1215 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 STN1Q9H668 368 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 ACTR5Q9H9F9 607 aaPredicted RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 SPAG4Q9NPE6 437 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 TMEM160Q9NX00 188 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 ALKBH4Q9NXW9 302 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 GGA3Q9NZ52 723 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 OGFRQ9NZT2 677 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 MSRB1Q9NZV6 116 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 CGNQ9P2M7 1197 aaKnown RBP2.85□□□□□ -1.95
VPS41-206ENST00000418457 HEY2Q9UBP5 337 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 COG5Q9UP83 839 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 ICKQ9UPZ9 632 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 HS3ST3B1Q9Y662 390 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 CCDC171Q6TFL3 1326 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 TMEM131LA2VDJ0 1609 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 RICTORQ6R327 1708 aa2.85□□□□□ -1.95
VPS41-206ENST00000418457 NEO1Q92859 1461 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 SPATA31D1Q6ZQQ2 1576 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 ALKQ9UM73 1620 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 A0A0G2JK05 382 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 A0A1W2PPC1 479 aa2.84□□□□□ -1.95
VPS41-206ENST00000418457 OR6C68A6NDL8 312 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms