RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PEX5LQ8IYB4 626 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 SETD9Q8NE22 299 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 DCLRE1BQ9H816 532 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ETNK2Q9NVF9 386 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 PPLO60437 1756 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 EML1O00423 815 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ITPKBP27987 946 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CDC25CP30307 473 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 SULT2A1Q06520 285 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 DUSP4Q13115 394 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 NEDD8Q15843 81 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 NPNTQ6UXI9 565 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 GPR135Q8IZ08 494 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CFAP52Q8N1V2 620 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 PDP2Q9P2J9 529 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ABHD14A-ACY1A0A1B0GW23 586 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 DCXO43602 365 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 PRLRP16471 622 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 FKBP1AP62942 108 aaKnown RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 RBBP4Q09028 425 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CBX2Q14781 532 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 PCID2Q5JVF3 399 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 NEPROQ6NW34 567 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CRTC3Q6UUV7 619 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 UBASH3BQ8TF42 649 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 NDNQ99608 321 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 NCOA3Q9Y6Q9 1424 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CCNYL3P0C7X3 344 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 FGFR3P22607 806 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 KDELR1P24390 212 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CYP2C18P33260 490 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 KCNN2Q9H2S1 579 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 MAPRE3Q9UPY8 281 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ASTN2O75129 1339 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 RASGRP1O95267 797 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ASGR1P07306 291 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ITGA1P56199 1179 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 DPYSL3Q14195 570 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 RNF148Q8N7C7 305 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MIEF2Q96C03 454 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 TEKT5Q96M29 485 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SEMA3CQ99985 751 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SIGLEC16A6NMB1 481 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SNPHO15079 494 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 KIF1CO43896 1103 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 OR1D2P34982 312 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SCTRP47872 440 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 CDK7P50613 346 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SMAD3P84022 425 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 TTC23Q5W5X9 447 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 FAM151BQ6UXP7 276 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 OR6Y1Q8NGX8 325 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ENKURQ8TC29 256 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 TLR5O60602 858 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MLYCDO95822 493 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 BCL10O95999 233 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 PCCBP05166 539 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MPPE1Q53F39 396 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MARK4Q96L34 752 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 GSTK1Q9Y2Q3 226 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 APOC4-APOC2K7ER74 178 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 FKBP6O75344 327 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 APOC2P02655 101 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 PIRTP0C851 137 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 BMP7P18075 431 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 AKT2P31751 481 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 NAB1Q13506 487 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ARMC8Q8IUR7 673 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 AHI1Q8N157 1196 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 NKAPQ8N5F7 415 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ELOVL2Q9NXB9 296 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 CORO2BQ9UQ03 480 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MYH15Q9Y2K3 1946 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ANKRD63C9JTQ0 380 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 F8VP50 259 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MRASO14807 208 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SCN2BO60939 215 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 CLUP10909 449 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 FLT3LGP49771 235 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 PROSER1Q86XN7 944 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 OR6K2Q8NGY2 324 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 FBXO30Q8TB52 745 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 SLC38A2Q96QD8 506 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 RHOBTB2Q9BYZ6 727 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-205ENST00000418258 PTPRJQ12913 1337 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 PSMD8P48556 350 aa11.3□□□□□ -0.6
PTCH1-205ENST00000418258 MAXP61244 160 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms