RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	TIGD5	Q53EQ6	642 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	TBCEL	Q5QJ74	424 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	SCARA3	Q6AZY7	606 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	CDYL2	Q8N8U2	506 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	FIG4	Q92562	907 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	VPS45	Q9NRW7	570 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	IMPAD1	Q9NX62	359 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	AGO1	Q9UL18	857 aa	Known RBP	13.36	□□□□□ -0.27
BDNF-208	ENST00000418212	DERA	Q9Y315	318 aa		13.36	□□□□□ -0.27
BDNF-208	ENST00000418212		C9IYK1	514 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	IFRD1	O00458	451 aa	Predicted RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	C1R	P00736	705 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	DDX5	P17844	614 aa	Known RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	GJA9	P57773	515 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	SETMAR	Q53H47	684 aa	Predicted RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	GRAMD4	Q6IC98	578 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	CTU1	Q7Z7A3	348 aa	Known RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	TAC4	Q86UU9	113 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	C10orf107	Q8IVU9	208 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	OR56A4	Q8NGH8	313 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	STAG3L4	Q8TBR4	150 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	SUSD6	Q92537	303 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	SNX27	Q96L92	541 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	RHOBTB2	Q9BYZ6	727 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	ZFP14	Q9HCL3	533 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	MIEF1	Q9NQG6	463 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	OPTC	Q9UBM4	332 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	DPP7	Q9UHL4	492 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	BTRC	Q9Y297	605 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	VAC14	Q08AM6	782 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	SERPINA13P	Q6UXR4	307 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	NECAB2	Q7Z6G3	386 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	OOSP2	Q86WS3	158 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	TMPRSS4	Q9NRS4	437 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	TRPC4	Q9UBN4	977 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	BLOC1S6	Q9UL45	172 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	PADI4	Q9UM07	663 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	SNX8	Q9Y5X2	465 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	TBX18	O95935	607 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	IL1B	P01584	269 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	OR56A5	P0C7T3	313 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	POLR2L	P62875	67 aa	Known RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	INTS6L	Q5JSJ4	861 aa	Known RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	TJAP1	Q5JTD0	557 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	SYPL2	Q5VXT5	272 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	RHBDF2	Q6PJF5	856 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	PATL1	Q86TB9	770 aa	Known RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	NPLOC4	Q8TAT6	608 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	RIN3	Q8TB24	985 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	C7orf43	Q8WVR3	580 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	ROGDI	Q9GZN7	287 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	AGO3	Q9H9G7	860 aa	Known RBP	13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	NMRK1	Q9NWW6	199 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	ACTL7B	Q9Y614	415 aa		13.35	□□□□□ -0.27
BDNF-208	ENST00000418212	DYTN	A2CJ06	578 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ZBTB14	O43829	449 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ME2	P23368	584 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	HNF4A	P41235	474 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	SLC16A1	P53985	500 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	IRF8	Q02556	426 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	SGCG	Q13326	291 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	BLMH	Q13867	455 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	STXBP5	Q5T5C0	1151 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	OR7D4	Q8NG98	312 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	NSMCE2	Q96MF7	247 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	GORASP1	Q9BQQ3	440 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	GIMAP4	Q9NUV9	329 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	MORF4L1	Q9UBU8	362 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	APPL1	Q9UKG1	709 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	PAIP2B	Q9ULR5	123 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ABCC6	O95255	1503 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	KANSL1L	A0AUZ9	987 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	C16orf96	A6NNT2	1141 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	TMEM114	B3SHH9	223 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ACADS	P16219	412 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ATP5F1	P24539	256 aa	Predicted RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	IL1R2	P27930	398 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ASPA	P45381	313 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	CLK1	P49759	484 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	UBE3A	Q05086	875 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	UBAP2L	Q14157	1087 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	BRMS1L	Q5PSV4	323 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	NOL9	Q5SY16	702 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	PLPP4	Q5VZY2	271 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	LRRC8D	Q7L1W4	858 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ALYREF	Q86V81	257 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	CASP10	Q92851	521 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	PNPO	Q9NVS9	261 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	LZTS1	Q9Y250	596 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	EFR3B	Q9Y2G0	817 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	PCDHGC4	Q9Y5F7	938 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	TRAV19	A0A0A6YYK7	116 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	OR6C75	A6NL08	312 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	PSMD12	O00232	456 aa	Predicted RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ADH1A	P07327	375 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	SELP	P16109	830 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms