RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 HAUS4Q9H6D7 363 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 NOL6Q9H6R4 1146 aaKnown RBP25.71■■□□□ 1.71
VEGFA-208ENST00000417285 MFHAS1Q9Y4C4 1052 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 ARID1BQ8NFD5 2236 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-208ENST00000417285 EIF3CLB5ME19 914 aaKnown RBP25.7■■□□□ 1.7
VEGFA-208ENST00000417285 FPGTO14772 594 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 SIGLEC6O43699 453 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 CREB3O43889 395 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 RABIFP47224 123 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 E2F1Q01094 437 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 MAMLD1Q13495 774 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 SERINC3Q13530 473 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 NR1I3Q14994 352 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 GDPD4Q6W3E5 623 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 KYAT3Q6YP21 454 aaKnown RBP25.7■■□□□ 1.7
VEGFA-208ENST00000417285 LEKR1Q6ZMV7 388 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 OR6K2Q8NGY2 324 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 OR4C6Q8NH72 309 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 KLHL32Q96NJ5 620 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 EIF3CQ99613 913 aaKnown RBP25.7■■□□□ 1.7
VEGFA-208ENST00000417285 DOCK9Q9BZ29 2069 aa25.7■■□□□ 1.7
VEGFA-208ENST00000417285 IGLON5A6NGN9 336 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 RASA4BC9J798 803 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 TRIM38O00635 465 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 RASA4O43374 803 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 TMCC1O94876 653 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 IGSF6O95976 241 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 UGT2B4P06133 528 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 ALPPL2P10696 532 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 GKP32189 559 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 PRKCIP41743 596 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 HNRNPKP61978 463 aaKnown RBP eCLIP25.69■■□□□ 1.78e-7■■■■□ 21.9
VEGFA-208ENST00000417285 KLHL30Q0D2K2 578 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 FGL2Q14314 439 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 TMC6Q7Z403 805 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 TTC7BQ86TV6 843 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 CBX8Q9HC52 389 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 GPR27Q9NS67 375 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 IPO11Q9UI26 975 aaKnown RBP25.69■■□□□ 1.7
VEGFA-208ENST00000417285 LHX6Q9UPM6 363 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 GPSM3Q9Y4H4 160 aa25.69■■□□□ 1.7
VEGFA-208ENST00000417285 POM121BA6NF01 834 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 PIAS2O75928 621 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 GZMAP12544 262 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 PTMSP20962 102 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 RHOAP61586 193 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 ATXN7L2Q5T6C5 722 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-208ENST00000417285 PLEKHA7Q6IQ23 1121 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 ZNF571Q7Z3V5 609 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-208ENST00000417285 PTAR1Q7Z6K3 402 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-208ENST00000417285 SLC22A18ASQ8N1D0 253 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 DENND6BQ8NEG7 585 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 HCAR2Q8TDS4 363 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 HMCESQ96FZ2 354 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 KLF6Q99612 283 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-208ENST00000417285 CPEB1Q9BZB8 566 aaKnown RBP25.68■■□□□ 1.7
VEGFA-208ENST00000417285 DNAJC28Q9NX36 388 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 DKK3Q9UBP4 350 aa25.68■■□□□ 1.7
VEGFA-208ENST00000417285 RALYQ9UKM9 306 aaKnown RBP25.68■■□□□ 1.7
VEGFA-208ENST00000417285 URB1O60287 2271 aaKnown RBP25.67■■□□□ 1.7
VEGFA-208ENST00000417285 SPTY2D1-AS1A0A0U1RR47 76 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 AREL1O15033 823 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 PSMA2P25787 234 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 SUOXP51687 545 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 NDST2P52849 883 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 OGDHQ02218 1023 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 FIGNQ5HY92 759 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 RFFLQ8WZ73 363 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 VOPP1Q96AW1 172 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 DUSP23Q9BVJ7 150 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 TRPM6Q9BX84 2022 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 UCKL1Q9NWZ5 548 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 NLGN3Q9NZ94 848 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 RAXQ9Y2V3 346 aa25.67■■□□□ 1.7
VEGFA-208ENST00000417285 TP53BP1Q12888 1972 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-208ENST00000417285 CHD5Q8TDI0 1954 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 SCAMP1O15126 338 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 RAD51BO15315 384 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 ATMINO43313 823 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-208ENST00000417285 FTLP02792 175 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-208ENST00000417285 ABL2P42684 1182 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 TPI1P60174 286 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 DAB2P98082 770 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 FANCCQ00597 558 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 TARDBPQ13148 414 aaKnown RBP eCLIP25.66■■□□□ 1.73e-6■■■■□ 20.1
VEGFA-208ENST00000417285 FZD2Q14332 565 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 GRM3Q14832 879 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 HES3Q5TGS1 186 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 E4F1Q66K89 784 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-208ENST00000417285 LUZP1Q86V48 1076 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 NXPE2Q96DL1 559 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 KLC2Q9H0B6 622 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 USP29Q9HBJ7 922 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 EVA1BQ9NVM1 165 aa25.66■■□□□ 1.7
VEGFA-208ENST00000417285 RNF8O76064 485 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 CSF2P04141 144 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 CKMT1AP12532 417 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 ERMARDQ5T6L9 678 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 PARGQ86W56 976 aa25.65■■□□□ 1.7
VEGFA-208ENST00000417285 TRIM11Q96F44 468 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms