RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 OTOL1A6NHN0 477 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 FAM170BA6NMN3 283 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 TMEM110-MUSTN1A8MSY1 372 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 WASH3PC4AMC7 463 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 C9orf172C9J069 976 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 FAM72CH0Y354 149 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 K7EQS6 105 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 AP3B1O00203 1094 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 MATN3O15232 486 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 DDX3YO15523 660 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 TSPAN3O60637 253 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 ZNF217O75362 1048 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 ZMPSTE24O75844 475 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 CNTN5O94779 1100 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 PRNPP04156 253 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 SP100P23497 879 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 NUDT1P36639 197 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 GARSP41250 739 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 RECQLP46063 649 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 SERPINH1P50454 418 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 RPL26P61254 145 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 PPIDQ08752 370 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 CAMK2GQ13555 558 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 ELAVL3Q14576 367 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 PON2Q15165 354 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 SMTNL2Q2TAL5 461 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 HNRNPA1L2Q32P51 320 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 ALFQ53S48 1182 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 ZNF569Q5MCW4 686 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 SPDYCQ5MJ68 293 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 FAM72AQ5TYM5 149 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 IL31Q6EBC2 164 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 ALG1LQ6GMV1 187 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 FAM72DQ6L9T8 149 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 RAB44Q7Z6P3 723 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 KBTBD6Q86V97 674 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 FAM72BQ86X60 149 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 CCDC50Q8IVM0 306 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 CDKL3Q8IVW4 592 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 SH2D3CQ8N5H7 860 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 ATPAF2Q8N5M1 289 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 ZNF513Q8N8E2 541 aaPredicted RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 TMIEQ8NEW7 156 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 PCDH19Q8TAB3 1148 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 CCHCR1Q8TD31 782 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 RAPGEF5Q92565 580 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 OLFM3Q96PB7 478 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 PSKH2Q96QS6 385 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 C19orf43Q9BQ61 176 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 TLR10Q9BXR5 811 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 CPEB1Q9BZB8 566 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 KLC2Q9H0B6 622 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 TMEM245Q9H330 911 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 LMAN1LQ9HAT1 526 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 VPS45Q9NRW7 570 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 KCTD5Q9NXV2 234 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 MPP6Q9NZW5 540 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 IPO11Q9UI26 975 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 DNPEPQ9ULA0 475 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 RPL26L1Q9UNX3 145 aaKnown RBP7.82□□□□□ -1.16
RBM39-209ENST00000416529 ERVW-1Q9UQF0 538 aa7.82□□□□□ -1.16
RBM39-209ENST00000416529 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 BCLAF3A2AJT9 711 aaKnown RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 GOLGA6CA6NDK9 693 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 GOLGA6BA6NDN3 693 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 SHISA7A6NL88 538 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 ERI2A8K979 691 aaKnown RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 CCDC188H7C350 402 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 MCF2LO15068 1137 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 PSMD3O43242 534 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 SLC7A4O43246 635 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 SYNCRIPO60506 623 aaKnown RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 CST8O60676 142 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 POP4O95707 220 aaKnown RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 GOLGA6DP0CG33 693 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 NID1P14543 1247 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 TARSP26639 723 aaKnown RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 OXTRP30559 389 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CD70P32970 193 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 ACTN2P35609 894 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CSKP41240 450 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 PAFAH1B1P43034 410 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CXCL12P48061 93 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 GNG11P61952 73 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 AP1S1P61966 158 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 IFI35P80217 286 aaPredicted RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 KLF1Q13351 362 aaPredicted RBP7.81□□□□□ -1.16
RBM39-209ENST00000416529 FZD5Q13467 585 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 UBXN2BQ14CS0 331 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 NOMO1Q15155 1222 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CRY1Q16526 586 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CCNG2Q16589 344 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CA9Q16790 459 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 CCDC181Q5TID7 509 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 NCBP2-AS2Q69YL0 99 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 MFSD7Q6UXD7 560 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 SERPINA13PQ6UXR4 307 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 C20orf204Q6ZNR8 217 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 USP30Q70CQ3 517 aa7.81□□□□□ -1.16
RBM39-209ENST00000416529 DNAAF5Q86Y56 855 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms