RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 PRNPP04156 253 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 UNGP13051 313 aaPredicted RBP13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 NME1P15531 152 aaKnown RBP13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 FLT3P36888 993 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 KRT83P78385 493 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 CCDC15Q0P6D6 951 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 CDO1Q16878 200 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 CLEC16AQ2KHT3 1053 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 DEFB133Q30KQ1 61 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 ZSCAN23Q3MJ62 389 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 PPP1R2P3Q6NXS1 205 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 LINGO4Q6UY18 593 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 KYAT3Q6YP21 454 aaKnown RBP13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 PRICKLE2Q7Z3G6 844 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 EMC1Q8N766 993 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 RXFP2Q8WXD0 754 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 NT5C3BQ969T7 300 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 HAPLN3Q96S86 360 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 KLF15Q9UIH9 416 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 MYO6Q9UM54 1294 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 COL6A6A6NMZ7 2263 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 SPTY2D1-AS1A0A0U1RR47 76 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 EME2A4GXA9 379 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 H3BM21 787 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 AQP9O43315 295 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 LEFTY1O75610 366 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 ENDOD1O94919 500 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 PAK4O96013 591 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 RHOCP08134 193 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 TFE3P19532 575 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 CLN3Q13286 438 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 ASIC2Q16515 512 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 ALFQ53S48 1182 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 TPRG1LQ5T0D9 272 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 APTXQ7Z2E3 356 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 PARGQ86W56 976 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 FAM131BQ86XD5 332 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 DCP2Q8IU60 420 aaKnown RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 FAM174AQ8TBP5 190 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 LMX1AQ8TE12 382 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 PCDHB18PQ96TA0 734 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 C2orf49Q9BVC5 232 aaPredicted RBP13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 HDAC8Q9BY41 377 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 SLC17A9Q9BYT1 436 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 IL36AQ9UHA7 158 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 HS3ST3A1Q9Y663 406 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 CSNK1G3Q9Y6M4 447 aa13.46□□□□□ -0.25
CTHRC1-202ENST00000415886 A0A0D9SEW6 157 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 A0A1W2PQC6 194 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 MUSKO15146 869 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 SPINT1O43278 529 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 TNFSF15O95150 251 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 ADRB3P13945 408 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 JUNDP17535 347 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 OR1E1P30953 314 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 RABIFP47224 123 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 NEK3P51956 506 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 PDX1P52945 283 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 RPS21P63220 83 aaKnown RBP13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 PDE1CQ14123 709 aaPredicted RBP13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 IQCB1Q15051 598 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 NR0B2Q15466 257 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 C5orf22Q49AR2 442 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 OTUD1Q5VV17 481 aaPredicted RBP13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 KIAA1161Q6NSJ0 714 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 DNAJC24Q6P3W2 148 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 DPY19L3Q6ZPD9 716 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 PHF13Q86YI8 300 aaPredicted RBP13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 DCAF4L2Q8NA75 395 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 GRAMD1AQ96CP6 724 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 PPP1R16AQ96I34 528 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 NAP1L5Q96NT1 182 aaPredicted RBP13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 ANLNQ9NQW6 1124 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 IPO11Q9UI26 975 aaKnown RBP13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 SALL4Q9UJQ4 1053 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 FADS3Q9Y5Q0 445 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 SNX10Q9Y5X0 201 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
CTHRC1-202ENST00000415886 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
CTHRC1-202ENST00000415886 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
CTHRC1-202ENST00000415886 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
CTHRC1-202ENST00000415886 DRGXA6NNA5 263 aa13.44□□□□□ -0.26
CTHRC1-202ENST00000415886 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
CTHRC1-202ENST00000415886 ZNF821O75541 412 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms