RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 KDM1BQ8NB78 822 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 RNF169Q8NCN4 708 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 GPRC5AQ8NFJ5 357 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 GPR78Q96P69 363 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 MED10Q9BTT4 135 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 COLEC11Q9BWP8 271 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 SUDS3Q9H7L9 328 aaPredicted RBP9.91□□□□□ -0.82
CD44-206ENST00000415148 CDHR5Q9HBB8 845 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 NCKIPSDQ9NZQ3 722 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 CEPT1Q9Y6K0 416 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 TCAF2A6NFQ2 919 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CLDN5O00501 218 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ANXA9O76027 345 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CSPG5O95196 566 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 STMN1P16949 149 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 YBX3P16989 372 aaKnown RBP eCLIP9.9□□□□□ -0.82
CD44-206ENST00000415148 HDCP19113 662 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CYP2C18P33260 490 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 GLRBP48167 497 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CXCR3P49682 368 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 MAP3K7CLP57077 242 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 TRAP1Q12931 704 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 STX5Q13190 355 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 POTEHQ6S545 545 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 DLK2Q6UY11 383 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CHSY3Q70JA7 882 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CPNE9Q8IYJ1 553 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CENPLQ8N0S6 344 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 PELI3Q8N2H9 469 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 TMEM102Q8N9M5 508 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 KCTD4Q8WVF5 259 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 GAB3Q8WWW8 586 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ITFG2Q969R8 447 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ASB9Q96DX5 294 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CCDC126Q96EE4 140 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 DUS3LQ96G46 650 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 FCRL5Q96RD9 977 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 MRPL57Q9BQC6 102 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 APOL2Q9BQE5 337 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 MRPL1Q9BYD6 325 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 ULBP1Q9BZM6 244 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 MRPL46Q9H2W6 279 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 WDCPQ9H6R7 721 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ANLNQ9NQW6 1124 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 OR12D3Q9UGF7 316 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 DNAH12Q6ZR08 3092 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CROCCQ5TZA2 2017 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 NUP205Q92621 2012 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 SBF1O95248 1867 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 MBLAC1A4D2B0 266 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 YJEFN3A6XGL0 299 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ADM5C9JUS6 153 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 TMX2-CTNND1H3BSU7 103 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 I6L893 689 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 ZBTB7AO95365 584 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 SNAI1O95863 264 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 JCHAINP01591 159 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 FAM58BPP0C7Q3 252 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 NCAM1P13591 858 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 TPH1P17752 444 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 SAT1P21673 171 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 GABRB3P28472 473 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 AVPR1AP37288 418 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 RABGGTBP53611 331 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 ZNF460Q14592 562 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 CYTH1Q15438 398 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 PSMD5Q16401 504 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 IRAK1BP1Q5VVH5 260 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 IL23RQ5VWK5 629 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 NXNQ6DKJ4 435 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 NUP93Q8N1F7 819 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 AFAP1L2Q8N4X5 818 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.82
CD44-206ENST00000415148 OR6J1Q8NGC5 347 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 IRGQQ8WZA9 623 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 ATP6V1E2Q96A05 226 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 OSMRQ99650 979 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 SLC2A11Q9BYW1 496 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 FAM49AQ9H0Q0 323 aaPredicted RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 PCDHAC1Q9H158 963 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 OSBPL2Q9H1P3 480 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 KLK14Q9P0G3 267 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 THEGQ9P2T0 379 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 SARDHQ9UL12 918 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 DMTF1Q9Y222 760 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 GINS2Q9Y248 185 aa9.9□□□□□ -0.82
CD44-206ENST00000415148 COPG1Q9Y678 874 aaKnown RBP9.9□□□□□ -0.82
CD44-206ENST00000415148 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 ARHGAP10A1A4S6 786 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 PHGDHO43175 533 aaKnown RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 TMCC1O94876 653 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 SMPD1P17405 629 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 PAMP19021 973 aa9.89□□□□□ -0.83
CD44-206ENST00000415148 ATP5F1P24539 256 aaPredicted RBP9.89□□□□□ -0.83
CD44-206ENST00000415148 HTR7P34969 479 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms