RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 BPIFB3P59826 476 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 IRX3P78415 501 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 FOXO1Q12778 655 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 BIRC3Q13489 604 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 DCTN1Q14203 1278 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ERV3-1Q14264 604 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 E2F5Q15329 346 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 BTBD16Q32M84 506 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZSCAN23Q3MJ62 389 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 WASHC2DQ5SRD0 308 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PLBD1Q6P4A8 553 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 AAGABQ6PD74 315 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 KLHL17Q6TDP4 642 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PARM1Q6UWI2 310 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ANKS1BQ7Z6G8 1248 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 IGFN1Q86VF2 1251 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 B4GALNT2Q8NHY0 566 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM110DQ8TAY7 271 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC2A12Q8TD20 617 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 CPT1BQ92523 772 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 IP6K1Q92551 441 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 INPP5DQ92835 1189 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 CENPTQ96BT3 561 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 CCDC34Q96HJ3 373 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLX1AQ9BQ83 275 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ISCUQ9H1K1 167 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 MAP6D1Q9H9H5 199 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PDE11AQ9HCR9 933 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 DIAPH3Q9NSV4 1193 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 SIRT3Q9NTG7 399 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMLHEQ9NVH6 421 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZNF580Q9UK33 172 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PKP3Q9Y446 797 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 ANKRD36BQ8N2N9 1353 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 CFAP74Q9C0B2 1584 aa3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 INO80Q9ULG1 1556 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PPRC1Q5VV67 1664 aaKnown RBP3.96□□□□□ -1.78
HMGB3P23-201ENST00000414981 PTCH1Q13635 1447 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARHGAP5Q13017 1502 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 ABCA6Q8N139 1617 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 UQCRHLA0A096LP55 91 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 RPS10-NUDT3A0A1W2PQS6 291 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 CXorf65A6NEN9 183 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 HNRNPRO43390 633 aaKnown RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 REC8O95072 547 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 UQCRHP07919 91 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 CAPN3P20807 821 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 HTR6P50406 440 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 PNLIPRP1P54315 467 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 RHAGQ02094 409 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 PPATQ06203 517 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 ALG10Q5BKT4 473 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 ALG10BQ5I7T1 473 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 TTC22Q5TAA0 569 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 TANGO2Q6ICL3 276 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 HMBOX1Q6NT76 420 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 C1orf228Q6PIY5 440 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 CRELD2Q6UXH1 353 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 CCDC129Q6ZRS4 1044 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 MEPCEQ7L2J0 689 aaKnown RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 GPSM1Q86YR5 675 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 MYLK4Q86YV6 388 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM185AQ8N0U4 392 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 SCAMP5Q8TAC9 235 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 OTUD7AQ8TE49 926 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 PIBF1Q8WXW3 757 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 THOC3Q96J01 351 aaKnown RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 PIGSQ96S52 555 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 RMDN3Q96TC7 470 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 NTPCRQ9BSD7 190 aaKnown RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM167BQ9BTA0 163 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 DDX23Q9BUQ8 820 aaKnown RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 HIPK2Q9H2X6 1198 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 ABHD16BQ9H3Z7 469 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 PNRC2Q9NPJ4 139 aaKnown RBP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC22A11Q9NSA0 550 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 SMC4Q9NTJ3 1288 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 BLOC1S4Q9NUP1 217 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 NDUFAF4Q9P032 175 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 TBC1D14Q9P2M4 693 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 BAG5Q9UL15 447 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 SMC3Q9UQE7 1217 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC4A4Q9Y6R1 1079 aa3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P23-201ENST00000414981 CDC42BPGQ6DT37 1551 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 PNPLA6Q8IY17 1366 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TRBV5-7A0A0A0MS05 114 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 AGAP5A6NIR3 686 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 CSTBP04080 98 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 PKMP14618 531 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARRB2P32121 409 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMPOP42166 694 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 RFX2P48378 723 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 SNX16P57768 344 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 RNASELQ05823 741 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 GABPB1Q06547 395 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 IFT88Q13099 833 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TBX2Q13207 712 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 PDE1CQ14123 709 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 RPS6KA2Q15349 733 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms