RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ART4Q93070 314 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 EFHD1Q9BUP0 239 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 TNKS2Q9H2K2 1166 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 KCTD3Q9Y597 815 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 SHANK1Q9Y566 2161 aa16.02■□□□□ 0.15
CPNE1-208ENST00000414711 MTORP42345 2549 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 NEMP1O14524 444 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 SMAD6O43541 496 aaKnown RBP16.01■□□□□ 0.15
CPNE1-208ENST00000414711 SNAP91O60641 907 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 RASGRP1O95267 797 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 CPNE6O95741 557 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 LDLRP01130 860 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 L1CAMP32004 1257 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 MC1RQ01726 317 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
CPNE1-208ENST00000414711 ARHGEF7Q14155 803 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 ALG11Q2TAA5 492 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 PMF1Q6P1K2 205 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 C16orf46Q6P387 395 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 PIM3Q86V86 326 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 TSACCQ96A04 125 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-208ENST00000414711 DHX58Q96C10 678 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 CCDC74BQ96LY2 380 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 RPRD1AQ96P16 312 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-208ENST00000414711 INTS2Q9H0H0 1204 aaKnown RBP16.01■□□□□ 0.15
CPNE1-208ENST00000414711 MUC3BQ9H195 1237 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 LRIT1Q9P2V4 623 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 VPS51Q9UID3 782 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 KCNMB2Q9Y691 235 aa16.01■□□□□ 0.15
CPNE1-208ENST00000414711 PDZD2O15018 2839 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 KCNU1A8MYU2 1149 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 FBXO21O94952 628 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 CASP1P29466 404 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 ABL2P42684 1182 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 IRAK1P51617 712 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 CLCN6P51797 869 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 KRT83P78385 493 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 NAA30Q147X3 362 aaPredicted RBP16■□□□□ 0.15
CPNE1-208ENST00000414711 EIF2S3LQ2VIR3 472 aaKnown RBP16■□□□□ 0.15
CPNE1-208ENST00000414711 FBXL22Q6P050 247 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 UNC5BQ8IZJ1 945 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 NLGN4XQ8N0W4 816 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 NLGN4YQ8NFZ3 816 aaPredicted RBP16■□□□□ 0.15
CPNE1-208ENST00000414711 PDCD6IPQ8WUM4 868 aaKnown RBP16■□□□□ 0.15
CPNE1-208ENST00000414711 SLC35F5Q8WV83 523 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 SEMA4DQ92854 862 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 EEF2KMTQ96G04 330 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 TCTN2Q96GX1 697 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 PSMB7Q99436 277 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 NUDT22Q9BRQ3 303 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 C2orf49Q9BVC5 232 aaPredicted RBP16■□□□□ 0.15
CPNE1-208ENST00000414711 ASPSCR1Q9BZE9 553 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 MIS12Q9H081 205 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 TMEM8AQ9HCN3 771 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 ERRFI1Q9UJM3 462 aaPredicted RBP16■□□□□ 0.15
CPNE1-208ENST00000414711 PILRAQ9UKJ1 303 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 MAP4K5Q9Y4K4 846 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 APCP25054 2843 aa16■□□□□ 0.15
CPNE1-208ENST00000414711 HIVEP1P15822 2718 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 LOC101059948A0A1B0GTJ6 334 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 TOR1BO14657 336 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 NUDT21O43809 227 aaKnown RBP15.99■□□□□ 0.15
CPNE1-208ENST00000414711 ENDOD1O94919 500 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 PRF1P14222 555 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 TCN2P20062 427 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 MRPL49Q13405 166 aaKnown RBP15.99■□□□□ 0.15
CPNE1-208ENST00000414711 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.155e-8■■□□□ 14.2
CPNE1-208ENST00000414711 AMZ1Q400G9 498 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 C14orf28Q4W4Y0 310 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 CRTC2Q53ET0 693 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-208ENST00000414711 LINGO4Q6UY18 593 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 INTS8Q75QN2 995 aaKnown RBP15.99■□□□□ 0.15
CPNE1-208ENST00000414711 TIPARPQ7Z3E1 657 aaKnown RBP15.99■□□□□ 0.15
CPNE1-208ENST00000414711 RD3Q7Z3Z2 195 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 SFTPA2Q8IWL1 248 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 PRR7Q8TB68 274 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 BLZF1Q9H2G9 400 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 SLC39A1Q9NY26 324 aa15.99■□□□□ 0.15
CPNE1-208ENST00000414711 LRP4O75096 1905 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 B4DGG1 531 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 VDRP11473 427 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 MAP4P27816 1152 aaKnown RBP15.98■□□□□ 0.15
CPNE1-208ENST00000414711 B4GALNT1Q00973 533 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 SYPL2Q5VXT5 272 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 SLC34A3Q8N130 599 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 AGBL5Q8NDL9 886 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 RAB7BQ96AH8 199 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 C1QTNF7Q9BXJ2 289 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 MBNL1Q9NR56 388 aaKnown RBP15.98■□□□□ 0.15
CPNE1-208ENST00000414711 SLC12A6Q9UHW9 1150 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 MTMR6Q9Y217 621 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 TBC1D30Q9Y2I9 924 aa15.98■□□□□ 0.15
CPNE1-208ENST00000414711 TCP11X1B4DZS4 312 aa15.97■□□□□ 0.15
CPNE1-208ENST00000414711 M0QYV0 167 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms