RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 ABCG4Q9H172 646 aa24.75■■□□□ 1.55
AC005540.1-201ENST00000413911 POLR1BQ9H9Y6 1135 aa24.75■■□□□ 1.55
AC005540.1-201ENST00000413911 TMEM248Q9NWD8 314 aa24.75■■□□□ 1.55
AC005540.1-201ENST00000413911 IPO11Q9UI26 975 aaKnown RBP24.75■■□□□ 1.55
AC005540.1-201ENST00000413911 CXorf51AA0A1B0GTR3 108 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 TEX51A0A1B0GUA7 166 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 CPED1A4D0V7 1026 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 C2CD4BA6NLJ0 364 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 KRIT1O00522 736 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 AREL1O15033 823 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 LZTS3O60299 673 aaPredicted RBP24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 GCATO75600 419 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 GFPT2O94808 682 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 LRIG2O94898 1065 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 UGT2B4P06133 528 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 ITIH2P19823 946 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 MAPKAPK2P49137 400 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 PCBP4P57723 403 aaKnown RBP24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 ISXQ2M1V0 245 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 MYLK3Q32MK0 819 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 MSANTD4Q8NCY6 345 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 OR2AP1Q8NGE2 309 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 LMX1AQ8TE12 382 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 ASB12Q8WXK4 309 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 RAB7BQ96AH8 199 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 KLHL32Q96NJ5 620 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 TAB2Q9NYJ8 693 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 ZNF462Q96JM2 2506 aa24.74■■□□□ 1.55
AC005540.1-201ENST00000413911 PMS2P1A4D2B8 440 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 EPHB6O15197 1021 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 GSRP00390 522 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 IGFALSP35858 605 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 HDAC4P56524 1084 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 PTP4A2Q12974 167 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 TCP11X2Q5H9J9 407 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 PERM1Q5SV97 790 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 CRTC1Q6UUV9 634 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 EFL1Q7Z2Z2 1120 aaKnown RBP24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 ZNF843Q8N446 348 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 LSM14AQ8ND56 463 aaKnown RBP24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 CENPIQ92674 756 aaPredicted RBP24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 C11orf70Q9BRQ4 267 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 KLC2Q9H0B6 622 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 MAGEH1Q9H213 219 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 NOL6Q9H6R4 1146 aaKnown RBP24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 CPNE5Q9HCH3 593 aa24.73■■□□□ 1.55
AC005540.1-201ENST00000413911 EME2A4GXA9 379 aaPredicted RBP24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 H3BM21 787 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 NEMP1O14524 444 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 PLEKP08567 350 aaPredicted RBP24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 SDC4P31431 198 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 ETFBP38117 255 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 CDR2Q01850 454 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 C1orf61Q13536 156 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 ZSCAN30Q86W11 494 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 LSMEM2Q8N112 164 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 DENND6BQ8NEG7 585 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 ATXN7L3BQ96GX2 97 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 PCDHB18PQ96TA0 734 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 MBNL1Q9NR56 388 aaKnown RBP24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 SALL4Q9UJQ4 1053 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 SATB2Q9UPW6 733 aa24.72■■□□□ 1.55
AC005540.1-201ENST00000413911 RP1P56715 2156 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 MMP20O60882 483 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 RAMP2O60895 175 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 POP4O95707 220 aaKnown RBP24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 PTPN9P43378 593 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 JAM2P57087 298 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 ERVPABLB-1P60509 514 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 SNRPD1P62314 119 aaKnown RBP24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 ARL13BQ3SXY8 428 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 VPS36Q86VN1 386 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 ZNF677Q86XU0 584 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 PYROXD2Q8N2H3 581 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 TBC1D31Q96DN5 1066 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 PRR11Q96HE9 360 aaPredicted RBP24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 VCPIP1Q96JH7 1222 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 BOCQ9BWV1 1114 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 ENTPD2Q9Y5L3 495 aa24.71■■□□□ 1.55
AC005540.1-201ENST00000413911 TPP1O14773 563 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 KDELR3O43731 214 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 TMCC1O94876 653 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 RFC1P35251 1148 aaPredicted RBP24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 POLD3Q15054 466 aaPredicted RBP24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 C3orf38Q5JPI3 329 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 GDPD4Q6W3E5 623 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 STRADAQ7RTN6 431 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 SLC35F3Q8IY50 421 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 FAM172AQ8WUF8 416 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 LRRC61Q9BV99 259 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 CLPBQ9H078 707 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 RETREG1Q9H6L5 497 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 EVA1BQ9NVM1 165 aa24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 FLNBO75369 2602 aaKnown RBP24.7■■□□□ 1.54
AC005540.1-201ENST00000413911 TENM4Q6N022 2769 aa24.69■■□□□ 1.54
AC005540.1-201ENST00000413911 MUSKO15146 869 aa24.69■■□□□ 1.54
AC005540.1-201ENST00000413911 CELA2BP08218 269 aaPredicted RBP24.69■■□□□ 1.54
AC005540.1-201ENST00000413911 UNGP13051 313 aaPredicted RBP24.69■■□□□ 1.54
AC005540.1-201ENST00000413911 TIMP2P16035 220 aa24.69■■□□□ 1.54
AC005540.1-201ENST00000413911 EEF1GP26641 437 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms