RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TMEM245Q9H330 911 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 PCDHB9Q9Y5E1 797 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 ARL5CA6NH57 179 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 GCATO75600 419 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 C22orf31O95567 290 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 ATP6V1C1P21283 382 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 PLK1P53350 603 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 AADACL2Q6P093 401 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 COLGALT2Q8IYK4 626 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 OR4L1Q8NH43 312 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 P2RY11Q96G91 374 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 KLQ9UEF7 1012 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 IFI35P80217 286 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 ELP6Q0PNE2 266 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 CRHR2Q13324 411 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 NOMO1Q15155 1222 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 ZNF513Q8N8E2 541 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 PTGR2Q8N8N7 351 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-202ENST00000413872 SPPL2AQ8TCT8 520 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 PPP3R2Q96LZ3 170 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 CPXM1Q96SM3 734 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 FZD8Q9H461 694 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 ACSS3Q9H6R3 686 aa17.43■□□□□ 0.38
PHRF1-202ENST00000413872 SCAMP3O14828 347 aaKnown RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 UQCRBP14927 111 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 PSMC3P17980 439 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 CORO1AP31146 461 aaKnown RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 NUP107P57740 925 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 LILRA4P59901 499 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 TBCELQ5QJ74 424 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 CYB5D1Q6P9G0 228 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ARCQ7LC44 396 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 KRT73Q86Y46 540 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 MREGQ8N565 214 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 EPS8L2Q9H6S3 715 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 SAR1AQ9NR31 198 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 SYBUQ9NX95 663 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 NEDD8-MDP1E9PL57 170 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ABCB1P08183 1280 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 IFNGR2P38484 337 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 CLCNKBP51801 687 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ACLYP53396 1101 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 DEFA1P59665 94 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 DEFA3P59666 94 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 TRAF2Q12933 501 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 INTS11Q5TA45 600 aaKnown RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 OTOP2Q7RTS6 562 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 FUBP3Q96I24 572 aaKnown RBP eCLIP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 MAGED4Q96JG8 741 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ZNHIT2Q9UHR6 403 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 RABGEF1Q9UJ41 708 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 GPSM3Q9Y4H4 160 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 EPN2O95208 641 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 RPA3P35244 121 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ZBTB49Q6ZSB9 765 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 PTCD2Q8WV60 388 aaKnown RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 UBOX5O94941 541 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 COX7A2P14406 83 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 TFEBP19484 476 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 TEX44Q53QW1 395 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 KLHL35Q6PF15 583 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 ZNF786Q8N393 782 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 GPR152Q8TDT2 470 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 CEP44Q9C0F1 390 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 SEMA4BQ9NPR2 832 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-202ENST00000413872 KLHL20Q9Y2M5 609 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 AP4S1Q9Y587 144 aa17.42■□□□□ 0.38
PHRF1-202ENST00000413872 E7ENQ6 273 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 PTPN2P17706 415 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 POU1F1P28069 291 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 NCF4Q15080 339 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 DUPD1Q68J44 220 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 PSRC1Q6PGN9 363 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 CSPG4P5Q96PW8 444 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 NDUFA13Q9P0J0 144 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 PDP2Q9P2J9 529 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 ARIH1Q9Y4X5 557 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 C5orf60A6NFR6 353 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 NDUFB5O43674 189 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 CYP7B1O75881 506 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 TACR2P21452 398 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 MARCKSL1P49006 195 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 BHLHB9Q6PI77 547 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 PIWIL2Q8TC59 973 aaKnown RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 C11orf84Q9BUA3 381 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 TMPRSS4Q9NRS4 437 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 KCNE2Q9Y6J6 123 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 MDM4O15151 490 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 C1RP00736 705 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 CST3P01034 146 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 TCF3P15923 654 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 ZFP1Q6P2D0 407 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 DQX1Q8TE96 717 aaKnown RBP17.41■□□□□ 0.38
PHRF1-202ENST00000413872 CENPTQ96BT3 561 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 RIPOR3Q96MK2 946 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 SOHLH2Q9NX45 425 aa17.41■□□□□ 0.38
PHRF1-202ENST00000413872 SRRDQ9UH36 339 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms