RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ARL13BQ3SXY8 428 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 ZNF805Q5CZA5 627 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 KIAA1614Q5VZ46 1190 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 CRTC1Q6UUV9 634 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 ARCQ7LC44 396 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 PHACTR4Q8IZ21 702 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 WDR36Q8NI36 951 aaKnown RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 WDR48Q8TAF3 677 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 BTN2A2Q8WVV5 523 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 ARHGEF2Q92974 986 aaKnown RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 NAT6Q93015 286 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 LIN37Q96GY3 246 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 IL12RB2Q99665 862 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 SPON2Q9BUD6 331 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 TM6SF2Q9BZW4 377 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 ZDHHC6Q9H6R6 413 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 SYNCQ9H7C4 482 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 NDFIP2Q9NV92 336 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 HECAQ9UBI9 543 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 SPASTQ9UBP0 616 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 APOBEC3BQ9UH17 382 aaKnown RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 RWDD2AQ9UIY3 292 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 TRPM6Q9BX84 2022 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 CCDC187A0A096LP49 1063 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 YY2O15391 372 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 SRGAP2O75044 1071 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 FGFR1OPO95684 399 aaKnown RBP12.35□□□□□ -0.43
LIMS2-210ENST00000413578 GSRP00390 522 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 ACVRL1P37023 503 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 DNA2P51530 1060 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 YPEL5P62699 121 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 FAM102AQ5T9C2 384 aaPredicted RBP12.35□□□□□ -0.43
LIMS2-210ENST00000413578 FAM131BQ86XD5 332 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 ARL14Q8N4G2 192 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 TMEM35BQ8NCS4 154 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 OR6K2Q8NGY2 324 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 CLMPQ9H6B4 373 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 IPO11Q9UI26 975 aaKnown RBP12.35□□□□□ -0.43
LIMS2-210ENST00000413578 ACSL6Q9UKU0 697 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 PCDHGA7Q9Y5G6 932 aa12.35□□□□□ -0.43
LIMS2-210ENST00000413578 TLN1Q9Y490 2541 aaKnown RBP12.35□□□□□ -0.43
LIMS2-210ENST00000413578 TDRD6O60522 2096 aaKnown RBP12.34□□□□□ -0.43
LIMS2-210ENST00000413578 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 TOR1BO14657 336 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 TNFSF15O95150 251 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 CYP11B1P15538 503 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 TSHRP16473 764 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 RPIAP49247 311 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
LIMS2-210ENST00000413578 C1orf61Q13536 156 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 PTK2BQ14289 1009 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 RAB6CQ53S08 254 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 PRRT3Q5FWE3 981 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 MACC1Q6ZN28 852 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 EXD3Q8N9H8 876 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 TP53I13Q8NBR0 393 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-210ENST00000413578 OR2AP1Q8NGE2 309 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 CFAP57Q96MR6 1250 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 CCDC3Q9BQI4 270 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 RAB6CQ9H0N0 254 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 RETREG1Q9H6L5 497 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
LIMS2-210ENST00000413578 RABGEF1Q9UJ41 708 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 ATXN7L1Q9ULK2 861 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-210ENST00000413578 PADI4Q9UM07 663 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 RP1P56715 2156 aa12.34□□□□□ -0.43
LIMS2-210ENST00000413578 NOBOXO60393 691 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 WISP1O95388 367 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 UGT2B4P06133 528 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 CELA2BP08218 269 aaPredicted RBP12.33□□□□□ -0.44
LIMS2-210ENST00000413578 KRT10P13645 584 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 ETFBP38117 255 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 MAPKAPK2P49137 400 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 THOP1P52888 689 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 BPIFB4P59827 614 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 MYLK3Q32MK0 819 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 LINC00303Q3SY05 128 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 C2CD6Q53TS8 623 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 B3GNT8Q7Z7M8 397 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 VPS36Q86VN1 386 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 ARL10Q8N8L6 244 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 GLMNQ92990 594 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 ARHGEF26Q96DR7 871 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 KLHL32Q96NJ5 620 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 CCNL2Q96S94 520 aaPredicted RBP12.33□□□□□ -0.44
LIMS2-210ENST00000413578 OSBPL1AQ9BXW6 950 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 SLC13A1Q9BZW2 595 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 TMEM248Q9NWD8 314 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 PTPN13Q12923 2485 aa12.33□□□□□ -0.44
LIMS2-210ENST00000413578 A0A1W2PQM1 296 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 D6RAR5 112 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 FAM72CH0Y354 149 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 NEMP1O14524 444 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 PLD2O14939 933 aa12.32□□□□□ -0.44
LIMS2-210ENST00000413578 MMP20O60882 483 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms