RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 F2RL1P55085 397 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CLDN2P57739 230 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 PSMC6P62333 389 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TUBA4AP68366 448 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TSPY1Q01534 308 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CALD1Q05682 793 aaKnown RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC18A2Q05940 514 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CSTF3Q12996 717 aaKnown RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 HIST2H2ACQ16777 129 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 ALG10Q5BKT4 473 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 ALG10BQ5I7T1 473 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZNF362Q5T0B9 420 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 ARMC3Q5W041 872 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TBC1D9BQ66K14 1250 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 LRRC8EQ6NSJ5 796 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CES5AQ6NT32 575 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 SARM1Q6SZW1 724 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CRELD2Q6UXH1 353 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CADM3Q8N126 398 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 DPP10Q8N608 796 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 AMER2Q8N7J2 671 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 NEK9Q8TD19 979 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 HDAC7Q8WUI4 952 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TMEM170AQ8WVE7 144 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 C1orf74Q96LT6 269 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 SIN3AQ96ST3 1273 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 PRRX2Q99811 253 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 NCAPGQ9BPX3 1015 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 STRA6Q9BX79 667 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 AAMDCQ9H7C9 122 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 PDE7BQ9NP56 450 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 DLGAP2Q9P1A6 1054 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 NFKBIL1Q9UBC1 381 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 A0A087X1B8 175 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 A0A1W2PQF6 199 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 CBY3A6NI87 242 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 NPIPB11E5RHQ5 1161 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 SEC14L5O43304 696 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 RAMP2O60895 175 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 OR2C1O95371 312 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 IPO7O95373 1038 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 PGM3O95394 542 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 WNT1P04628 370 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ADRB1P08588 477 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 PTPN2P17706 415 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC16A2P36021 539 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 UBA7P41226 1012 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 GABRB2P47870 512 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 CLCN5P51795 746 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 HDAC4P56524 1084 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 NIPAL4Q0D2K0 466 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 STIM1Q13586 685 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 FGFBP1Q14512 234 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ALG11Q2TAA5 492 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZSCAN23Q3MJ62 389 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 EARS2Q5JPH6 523 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 RAB41Q5JT25 222 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ENTPD8Q5MY95 495 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 PLEKHS1Q5SXH7 462 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 FCRLBQ6BAA4 426 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC30A6Q6NXT4 461 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 FBXO42Q6P3S6 717 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 OLFML1Q6UWY5 402 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 TBC1D26Q86UD7 250 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 TEX11Q8IYF3 940 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZCCHC9Q8N567 271 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 CCDC191Q8NCU4 936 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 OR4N2Q8NGD1 307 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 GPR150Q8NGU9 434 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZNF398Q8TD17 642 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZC3HAV1LQ96H79 300 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 PIMREGQ9BSJ6 248 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 WDR6Q9NNW5 1121 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ASAH2Q9NR71 780 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 ARPP21Q9UBL0 812 aaPredicted RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 CNOT8Q9UFF9 292 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 MTMR6Q9Y217 621 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 CARD8Q9Y2G2 431 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 AAR2Q9Y312 384 aaKnown RBP5□□□□□ -1.61
HMGB3P31-201ENST00000413333 RAP2CQ9Y3L5 183 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 SESN1Q9Y6P5 492 aa5□□□□□ -1.61
HMGB3P31-201ENST00000413333 FOXO6A8MYZ6 492 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 KIF1CO43896 1103 aaKnown RBP4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 ATP2C2O75185 946 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 NKX2-2O95096 273 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 LCKP06239 509 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 RB1P06400 928 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 ADRB2P07550 413 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 ITGAXP20702 1163 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 CDAP32320 146 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 RFC1P35251 1148 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 MRPL12P52815 198 aaKnown RBP4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 TMPRSS3P57727 454 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 HSF1Q00613 529 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 POU5F1Q01860 360 aaKnown RBP4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 GRIK3Q13003 919 aa4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 FAM133BQ5BKY9 247 aaKnown RBP4.99□□□□□ -1.61
HMGB3P31-201ENST00000413333 BMP2KLQ5H9B9 411 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms