RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 AKAP3O75969 853 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 RTN3O95197 1032 aaPredicted RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NDUFA10O95299 355 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 LCA5LO95447 670 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ASS1P00966 412 aaKnown RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NTRK1P04629 796 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 TRIM49P0CI25 452 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 TRIM49CP0CI26 452 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CCDC130P13994 396 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 TRIM21P19474 475 aaKnown RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 YWHAQP27348 245 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 PRCPP42785 496 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 PPP3CCP48454 512 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 GCLMP48507 274 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NDST1P52848 882 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NOP14P78316 857 aaKnown RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ENPEPQ07075 957 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 PPP3CAQ08209 521 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 TAF10Q12962 218 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ZNF77Q15935 545 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 PREPLQ4J6C6 727 aaPredicted RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ZCWPW2Q504Y3 356 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 COBLL1Q53SF7 1204 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 Q6ZS52 159 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 PAQR9Q6ZVX9 377 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ACOT1Q86TX2 421 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 UNC93AQ86WB7 457 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 KBTBD2Q8IY47 623 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NUP93Q8N1F7 819 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CRYBG2Q8N1P7 616 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 SYNPOQ8N3V7 929 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 SPEM1Q8N4L4 309 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 KLHL36Q8N4N3 616 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 SUMF1Q8NBK3 374 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NOA1Q8NC60 698 aaKnown RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ZBTB44Q8NCP5 570 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NELL1Q92832 810 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 FBXO32Q969P5 355 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 SMARCD1Q96GM5 515 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 KCNK16Q96T55 309 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CRACR2AQ9BSW2 395 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NUP58Q9BVL2 599 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CAPS2Q9BXY5 557 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 EDEM3Q9BZQ6 932 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 IMPG2Q9BZV3 1241 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 MMRN2Q9H8L6 949 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ECT2Q9H8V3 914 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CYP3A43Q9HB55 503 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 DMAP1Q9NPF5 467 aaPredicted RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 SAMSN1Q9NSI8 373 aaKnown RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ABHD10Q9NUJ1 306 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 TMEM30AQ9NV96 361 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 RMND1Q9NWS8 449 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 DUS2Q9NX74 493 aaKnown RBP5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NCDNQ9UBB6 729 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ARHGAP26Q9UNA1 814 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ZNF451Q9Y4E5 1061 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 WNT6Q9Y6F9 365 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 NUP205Q92621 2012 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 THADAQ6YHU6 1953 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 VPS13AQ96RL7 3174 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CCDC189A1A4V9 331 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GOLGA6CA6NDK9 693 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TTC36A6NLP5 189 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 LEFTY2O00292 366 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CES2O00748 559 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TRDMT1O14717 391 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 PJA2O43164 708 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TEX33O43247 280 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 KRT86O43790 486 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 NFATC1O95644 943 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 OLFM2O95897 454 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 OAS1P00973 400 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GOLGA6DP0CG33 693 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 MBL2P11226 248 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TDGF1P13385 188 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TCF3P15923 654 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CD58P19256 250 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 DRD1P21728 446 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TGM1P22735 817 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 EEF1GP26641 437 aaKnown RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 ADORA2BP29275 332 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CASP14P31944 242 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GTF2H1P32780 548 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GJA4P35212 333 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 PPP1R2P41236 205 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 FNTBP49356 437 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 MXI1P50539 228 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 SLC7A9P82251 487 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 GRSF1Q12849 480 aaKnown RBP eCLIP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 RIPK1Q13546 671 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 CRYMQ14894 314 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 SLMAPQ14BN4 828 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 EDRF1Q3B7T1 1238 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 LACTB2Q53H82 288 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 TMEM196Q5HYL7 178 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 ZNF658Q5TYW1 1059 aaPredicted RBP5.5□□□□□ -1.53
LINC00342-201ENST00000412393 KRT39Q6A163 491 aa5.5□□□□□ -1.53
LINC00342-201ENST00000412393 HEATR6Q6AI08 1181 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms