RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CCDC15Q0P6D6 951 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 FRG1Q14331 258 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 FAM187BQ17R55 369 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 AARS2Q5JTZ9 985 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ACSM6Q6P461 480 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SLC9B2Q86UD5 537 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ARHGAP12Q8IWW6 846 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 IL17RCQ8NAC3 791 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CADM4Q8NFZ8 388 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SETD6Q8TBK2 473 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 MRPS27Q92552 414 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CNOT9Q92600 299 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 NPIPB3Q92617 1050 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 KCNJ9Q92806 393 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 CENPTQ96BT3 561 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 TUBB6Q9BUF5 446 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF747Q9BV97 191 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 FUT8Q9BYC5 575 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SAP30LQ9HAJ7 183 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 IL1RAPL1Q9NZN1 696 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 NENFQ9UMX5 172 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 PPIEQ9UNP9 301 aaKnown RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 PCDHB2Q9Y5E7 798 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 POMT1Q9Y6A1 747 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 EPN1Q9Y6I3 576 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-204ENST00000412061 SESN1Q9Y6P5 492 aa4.72□□□□□ -1.65
BRCA1-204ENST00000412061 GRID2IPA4D2P6 1211 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 EIF3CLB5ME19 914 aaKnown RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 NPIPB8E9PQR5 432 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 SUV39H1O43463 412 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 EXOC3O60645 756 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 ABCB1P08183 1280 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 FDPSP14324 419 aaKnown RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 GAP43P17677 238 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 MATN1P21941 496 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 STAT2P52630 851 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 MVDP53602 400 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 POLGP54098 1239 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 MFAP4P55083 255 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 POLR2FP61218 127 aaKnown RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 ARHGAP8P85298 464 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 ABHD18Q0P651 414 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 LMAN2Q12907 356 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 FOXI1Q12951 378 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 SEMA3AQ14563 771 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 DPCR1Q3MIW9 517 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 ZNF667Q5HYK9 610 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 PCID2Q5JVF3 399 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 MPP7Q5T2T1 576 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 KIAA0930Q6ICG6 404 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 SUSD1Q6UWL2 747 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 KIRREL2Q6UWL6 708 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 C16orf89Q6UX73 402 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 KBTBD6Q86V97 674 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 TICAM1Q8IUC6 712 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 VRK3Q8IV63 474 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 C12orf76Q8N812 135 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 BEND2Q8NDZ0 799 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 OR52L2PQ8NGH6 319 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 MAFAQ8NHW3 353 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 GLMPQ8WWB7 406 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 FAM162AQ96A26 154 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 FAM149B1Q96BN6 582 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 PRR11Q96HE9 360 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 PDLIM2Q96JY6 352 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 CCDC114Q96M63 670 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 AK8Q96MA6 479 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 TMEM237Q96Q45 408 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 NAA11Q9BSU3 229 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 THAP7Q9BT49 309 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 HEMGNQ9BXL5 484 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 FAM129AQ9BZQ8 928 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 TSPY26PQ9H489 355 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 EPHX3Q9H6B9 360 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 USP29Q9HBJ7 922 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 RRP7BPQ9NSQ0 103 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 HPF1Q9NWY4 346 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 PEMTQ9UBM1 199 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 XPO7Q9UIA9 1087 aaKnown RBP4.71□□□□□ -1.66
BRCA1-204ENST00000412061 CDH22Q9UJ99 828 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 RABL2BQ9UNT1 228 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 KLHL20Q9Y2M5 609 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 CAPN7Q9Y6W3 813 aa4.71□□□□□ -1.66
BRCA1-204ENST00000412061 ADGRF5Q8IZF2 1346 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 OR2A25A4D2G3 310 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 A8MZ25 164 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 KCNJ18B7U540 433 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 SNAP23O00161 211 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 ZNF213O14771 459 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 LIASO43766 372 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 KINO60870 393 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 C22orf31O95567 290 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 GUCA1CO95843 209 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 CYP3A4P08684 503 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 PRR35P0CG20 571 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 PCP11498 1178 aaKnown RBP4.7□□□□□ -1.66
BRCA1-204ENST00000412061 GABRB1P18505 474 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 FPR3P25089 353 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 ITPKBP27987 946 aa4.7□□□□□ -1.66
BRCA1-204ENST00000412061 AVPR2P30518 371 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms