RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 HNRNPDLO14979 420 aaKnown RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 MID1O15344 667 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 HSPA12AO43301 675 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 HNRNPCL1O60812 293 aaKnown RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 LARGE1O95461 756 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 HLA-DQA2P01906 255 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 COL2A1P02458 1487 aaPredicted RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 CSF1P09603 554 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 HNRNPCL4P0DMR1 293 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 FMO4P31512 558 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 TM4SF4P48230 202 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 PHEXP78562 749 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC18A2Q05940 514 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 GALNT1Q10472 559 aaPredicted RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 SPARCL1Q14515 664 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 EFNB3Q15768 340 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 ME3Q16798 604 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 GXYLT1Q4G148 440 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 ARL6IP4Q66PJ3 421 aaKnown RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 LIN54Q6MZP7 749 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 CCDC129Q6ZRS4 1044 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC26A9Q7LBE3 791 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 TRMT1LQ7Z2T5 733 aaKnown RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 ODF3L1Q8IXM7 274 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 MB21D2Q8IYB1 491 aaPredicted RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 SETD9Q8NE22 299 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 TAS1R2Q8TE23 839 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 CREB3L4Q8TEY5 395 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 TRIB2Q92519 343 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 FBXO17Q96EF6 278 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 C3orf30Q96M34 536 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 TTC14Q96N46 770 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 FRG2BQ96QU4 278 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 YME1L1Q96TA2 773 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 LITAFQ99732 161 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 EIF2AQ9BY44 585 aaKnown RBP1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 BRD8Q9H0E9 1235 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 PLEKHA2Q9HB19 425 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 THAP1Q9NVV9 213 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 CHPF2Q9P2E5 772 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 KLHL42Q9P2K6 505 aa1.53□□□□□ -2.16
RNU2-55P-201ENST00000411146 CGNL1Q0VF96 1302 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 PDS5AQ29RF7 1337 aaKnown RBP1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 LOC105371045A0A1W2PR82 267 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 RGS11O94810 467 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 CYP4B1P13584 511 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 HLA-DOBP13765 273 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 NR1D1P20393 614 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 ALDH4A1P30038 563 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 PCP4P48539 62 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 PEX5P50542 639 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 NR0B1P51843 470 aaKnown RBP1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 MVDP53602 400 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 ERVK11-1P61568 191 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 FAM27E3Q08E93 113 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 IL13RA2Q14627 380 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 RPE65Q16518 533 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 EFHC1Q5JVL4 640 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 STXBP5Q5T5C0 1151 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 LCE3AQ5TA76 89 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 ZNF772Q68DY9 489 aaPredicted RBP1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 ARHGAP17Q68EM7 881 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 IL31Q6EBC2 164 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 C19orf48Q6RUI8 117 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 SYT13Q7L8C5 426 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 DPP9Q86TI2 863 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 MCPH1Q8NEM0 835 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 PJA1Q8NG27 643 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 BBS10Q8TAM1 723 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 SLC2A12Q8TD20 617 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 CSGALNACT1Q8TDX6 532 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 TBC1D22AQ8WUA7 517 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 CPT1BQ92523 772 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 FIG4Q92562 907 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 TANKQ92844 425 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 CCDC138Q96M89 665 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 DDX23Q9BUQ8 820 aaKnown RBP1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 IFT27Q9BW83 186 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 CTDSP1Q9GZU7 261 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 PABPC3Q9H361 631 aaKnown RBP1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 ELAC1Q9H777 363 aaKnown RBP1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 EBF2Q9HAK2 575 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 PRDM8Q9NQV8 689 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 GRHL1Q9NZI5 618 aa1.52□□□□□ -2.17
RNU2-55P-201ENST00000411146 ADGRF5Q8IZF2 1346 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 ANO9A1A5B4 782 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 KRTAP16-1A8MUX0 517 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 C16orf97H3BN30 126 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 IFNL4K9M1U5 179 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 FGF17O60258 216 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 ZNF500O60304 480 aaPredicted RBP1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 ZIC3O60481 467 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 NDUFS7O75251 213 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 ACTL6BO94805 426 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 TRIM27P14373 513 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 CTPS1P17812 591 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 TTKP33981 857 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 NEK3P51956 506 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 OAZ1P54368 228 aa1.51□□□□□ -2.17
RNU2-55P-201ENST00000411146 RELQ04864 619 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms