RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 TP53INP2Q8IXH6 220 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 PIP4K2CQ8TBX8 421 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 SLC26A7Q8TE54 656 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 GIPC2Q8TF65 315 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 COG4Q9H9E3 785 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 TRHDEQ9UKU6 1024 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 F9P00740 461 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 DNAJB2P25686 324 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 PTPN3P26045 913 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 ARRB2P32121 409 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 OR1D2P34982 312 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 NUMBP49757 651 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 ZNF135P52742 658 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-207ENST00000409808 ANKRD20A4Q4UJ75 823 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 FSTL4Q6MZW2 842 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 ATG14Q6ZNE5 492 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 OR52K1Q8NGK4 314 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 ZNF669Q96BR6 464 aaPredicted RBP20.04■□□□□ 0.8
LIMS2-207ENST00000409808 PIH1D1Q9NWS0 290 aaKnown RBP20.04■□□□□ 0.8
LIMS2-207ENST00000409808 NSMCE4AQ9NXX6 385 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 SCML2Q9UQR0 700 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 POMPQ9Y244 141 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 ANKRD6Q9Y2G4 727 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 MRPL42Q9Y6G3 142 aaKnown RBP20.04■□□□□ 0.8
LIMS2-207ENST00000409808 GREB1Q4ZG55 1949 aa20.04■□□□□ 0.8
LIMS2-207ENST00000409808 G3V2L1 256 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 SLC22A2O15244 555 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 DNAJB1P25685 340 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 EPHB1P54762 984 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 SCAPQ12770 1279 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 KLF10Q13118 480 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 BTG3Q14201 252 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 PSMD5Q16401 504 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 CWF19L1Q69YN2 538 aaKnown RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 DEFB107AQ8IZN7 70 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 VAT1Q99536 393 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 RC3H2Q9HBD1 1191 aaKnown RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 PTPRSQ13332 1948 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 PLXNA3P51805 1871 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 A0A096LPK6 155 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 ZCWPW2A0A1B0GU75 182 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 IGLV3-25P01717 112 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 UBTFL6P0CB48 400 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 THRAP10827 490 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 MTTPP55157 894 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 PPIDQ08752 370 aaKnown RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 SEMA3BQ13214 749 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 ITPRIPL1Q6GPH6 555 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 KIAA1841Q6NSI8 718 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 PYDC1Q8WXC3 89 aa20.03■□□□□ 0.8
LIMS2-207ENST00000409808 ILKAPQ9H0C8 392 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 PRPF19Q9UMS4 504 aaKnown RBP20.03■□□□□ 0.8
LIMS2-207ENST00000409808 CASQ2O14958 399 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-207ENST00000409808 IRAK2O43187 625 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 HAPLN1P10915 354 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-207ENST00000409808 UQCRBP14927 111 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 ADSLP30566 484 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-207ENST00000409808 TBL3Q12788 808 aaKnown RBP20.02■□□□□ 0.8
LIMS2-207ENST00000409808 EIF4EBP2Q13542 120 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-207ENST00000409808 CUL3Q13618 768 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 C11orf91Q3C1V1 193 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 ARL13BQ3SXY8 428 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 THEMIS2Q5TEJ8 643 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 KCTD11Q693B1 232 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 RAPH1Q70E73 1250 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 CMC1Q7Z7K0 106 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 RNF168Q8IYW5 571 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-207ENST00000409808 TMEM199Q8N511 208 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 SPPL2BQ8TCT7 592 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 CEP41Q9BYV8 373 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 SIK2Q9H0K1 926 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 NMRAL1Q9HBL8 299 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 MTRRQ9UBK8 725 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 OR12D3Q9UGF7 316 aa20.02■□□□□ 0.8
LIMS2-207ENST00000409808 TBX18O95935 607 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 EN2P19622 333 aaPredicted RBP20.02■□□□□ 0.79
LIMS2-207ENST00000409808 GLDCP23378 1020 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 MED21Q13503 144 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 VWA5B1Q5TIE3 1220 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 CES3Q6UWW8 571 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 FRMD7Q6ZUT3 714 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 C16orf59Q7L2K0 433 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 SDCCAG8Q86SQ7 713 aaPredicted RBP20.02■□□□□ 0.79
LIMS2-207ENST00000409808 MON1AQ86VX9 555 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 ST13P4Q8IZP2 240 aaPredicted RBP20.02■□□□□ 0.79
LIMS2-207ENST00000409808 ZNF781Q8N8C0 355 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 DNAAF3Q8N9W5 541 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 CNDP1Q96KN2 507 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 SERPINI1Q99574 410 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 FBXO44Q9H4M3 255 aa20.02■□□□□ 0.79
LIMS2-207ENST00000409808 NUP205Q92621 2012 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 PSMD3O43242 534 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 DCXO43602 365 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 ERCC2P18074 760 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 YWHAQP27348 245 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 TPI1P60174 286 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 BEND5Q7L4P6 421 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 SETD3Q86TU7 594 aaPredicted RBP20.01■□□□□ 0.79
LIMS2-207ENST00000409808 KBTBD6Q86V97 674 aa20.01■□□□□ 0.79
LIMS2-207ENST00000409808 PLD6Q8N2A8 252 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms