RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 USO1O60763 962 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 GFPT2O94808 682 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 GCSHP23434 173 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 CHMP24386 653 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 TMOD1P28289 359 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 PPIFP30405 207 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 CD52P31358 61 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 CNR2P34972 360 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 CASP6P55212 293 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 PSMC5P62195 406 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 ORC2Q13416 577 aaPredicted RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 SLC45A4Q5BKX6 768 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 XKR3Q5GH77 459 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 TMCO2Q7Z6W1 182 aaPredicted RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 CCDC83Q8IWF9 413 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 KBTBD2Q8IY47 623 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 POC1BQ8TC44 478 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 CPT1CQ8TCG5 803 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 BPIFB1Q8TDL5 484 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 ARNTL2Q8WYA1 636 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 TOP1MTQ969P6 601 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 GRAMD1AQ96CP6 724 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 C8orf76Q96K31 380 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 C20orf173Q96LM9 149 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 WDR24Q96S15 920 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 JPH2Q9BR39 696 aaPredicted RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 NUDT16L1Q9BRJ7 211 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 PAIP1Q9H074 479 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 ELAC1Q9H777 363 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 AGO3Q9H9G7 860 aaKnown RBP6.55□□□□□ -1.36
LSM5-203ENST00000409782 ERVK-5Q9HDB9 667 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 NRBP2Q9NSY0 501 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 TBC1D30Q9Y2I9 924 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 NEU2Q9Y3R4 380 aa6.55□□□□□ -1.36
LSM5-203ENST00000409782 RALGAPA2Q2PPJ7 1873 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 A0A1W2PPH5 198 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 FSD2A1L4K1 749 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 EPOPA6NHQ4 379 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 PRR5-ARHGAP8B1AHC4 643 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 BTBD18B2RXH4 712 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 E7EVH7 732 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 MATN2O00339 956 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 NEMFO60524 1076 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 RTN3O95197 1032 aaPredicted RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 BAG4O95429 457 aaKnown RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 STAG3L1P0CL83 205 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 SRGAP2BP0DMP2 458 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 PSMC2P35998 433 aaKnown RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 QARSP47897 775 aaKnown RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 CLCN3P51790 818 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 CRYBB1P53674 252 aaPredicted RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 KRT17Q04695 432 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 BOP1Q14137 746 aaKnown RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 KCNAB1Q14722 419 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 ACAP1Q15027 740 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 CALCRLQ16602 461 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 MEA1Q16626 185 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 RNF151Q2KHN1 245 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 CTXN3Q4LDR2 81 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 EARS2Q5JPH6 523 aaKnown RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 CACHD1Q5VU97 1274 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 ATG16L1Q676U5 607 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 DGAT2L7PQ6IED9 249 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 RINT1Q6NUQ1 792 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 EFCAB12Q6NXP0 572 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 TTC30AQ86WT1 665 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 METTL13Q8N6R0 699 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 FAM184AQ8NB25 1140 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 NEK9Q8TD19 979 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 GDPD5Q8WTR4 605 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 UCMAQ8WVF2 138 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 HAS1Q92839 578 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 ZNF512Q96ME7 567 aaPredicted RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 FOXP1Q9H334 677 aaPredicted RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 UNKLQ9H9P5 680 aaKnown RBP6.54□□□□□ -1.36
LSM5-203ENST00000409782 THEGQ9P2T0 379 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 PADI3Q9ULW8 664 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 CNTN6Q9UQ52 1028 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 GINS2Q9Y248 185 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 KIF3AQ9Y496 699 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.54□□□□□ -1.36
LSM5-203ENST00000409782 DUSP10Q9Y6W6 482 aa6.54□□□□□ -1.36
LSM5-203ENST00000409782 IGKV6-21A0A0C4DH24 114 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 A0A1W2PRX2 142 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 GXYLT2A0PJZ3 443 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 J3KTA2 159 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 B4GALT3O60512 393 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 LPXNO60711 386 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 RPS6KA5O75582 802 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 STBD1O95210 358 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 LYPLA2O95372 231 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 SCGB1D1O95968 90 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 VTNP04004 478 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 CSF1P09603 554 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 HNRNPA1P09651 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
LSM5-203ENST00000409782 DARSP14868 501 aaKnown RBP6.53□□□□□ -1.36
LSM5-203ENST00000409782 TGM1P22735 817 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 SLC6A2P23975 617 aa6.53□□□□□ -1.36
LSM5-203ENST00000409782 SERPINA4P29622 427 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms