RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SERPINH1P50454 418 aaKnown RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 ADGRE1Q14246 886 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 GRM2Q14416 872 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 CRYMQ14894 314 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 SLC1A5Q15758 541 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 KLHL38Q2WGJ6 581 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 EML3Q32P44 896 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 PPM1NQ8N819 430 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 PDCD6IPQ8WUM4 868 aaKnown RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 MFSD3Q96ES6 412 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 LMLNQ96KR4 655 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 FCRL3Q96P31 734 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 MYADMQ96S97 322 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 CYTH2Q99418 400 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 PAFAH2Q99487 392 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 IL22Q9GZX6 179 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 S1PR5Q9H228 398 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 TNKS2Q9H2K2 1166 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 ZFP14Q9HCL3 533 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 LHX3Q9UBR4 397 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 CHKBQ9Y259 395 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 OTOL1A6NHN0 477 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-204ENST00000409727 CDH16O75309 829 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 FAM155BO75949 473 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 POLBP06746 335 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 FCARP24071 287 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 MSH2P43246 934 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 CBLBQ13191 982 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 SIRPB2Q5JXA9 342 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 CROCCP2Q86T23 111 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ACDQ96AP0 544 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 PGM2Q96G03 612 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ZNF778Q96MU6 729 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 KXD1Q9BQD3 176 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 SLC17A6Q9P2U8 582 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 IKBKGQ9Y6K9 419 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 XIRP2A4UGR9 3374 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 MIA3Q5JRA6 1907 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 AP3B1O00203 1094 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 UGT1A9O60656 530 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 TCEA3O75764 348 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ADH1CP00326 375 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 PRKCGP05129 697 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 PIRTP0C851 137 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ERVK-10P10266 1014 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 CR2P20023 1033 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 NMBRP28336 390 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ATP1A2P50993 1020 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 CDK18Q07002 472 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ACCSLQ4AC99 568 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 INO80DQ53TQ3 878 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-204ENST00000409727 ALG1LQ6GMV1 187 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 VITQ6UXI7 678 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 C12orf40Q86WS4 652 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 RYBPQ8N488 228 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-204ENST00000409727 PPHLN1Q8NEY8 458 aaKnown RBP12.59□□□□□ -0.39
CHMP3-204ENST00000409727 FAM76AQ8TAV0 307 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 TADA1Q96BN2 335 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 NUDCD1Q96RS6 583 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 NAT9Q9BTE0 207 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 PLA2G2FQ9BZM2 168 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 POMKQ9H5K3 350 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 UGT1A7Q9HAW7 530 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 UGT1A10Q9HAW8 530 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 UGT1A8Q9HAW9 530 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 SMYD2Q9NRG4 433 aa12.59□□□□□ -0.39
CHMP3-204ENST00000409727 GOLGA8TH3BQL2 631 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-204ENST00000409727 GSTA2P09210 222 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 ATXN1LP0C7T5 689 aaKnown RBP12.58□□□□□ -0.4
CHMP3-204ENST00000409727 NR1D1P20393 614 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 GKP32189 559 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 LTBRP36941 435 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 PLK1P53350 603 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 LRIT3Q3SXY7 679 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 STEAP4Q687X5 459 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 RASSF3Q86WH2 238 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHMP3-204ENST00000409727 CYB5D2Q8WUJ1 264 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 TLCD1Q96CP7 247 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 THG1LQ9NWX6 298 aaKnown RBP12.58□□□□□ -0.4
CHMP3-204ENST00000409727 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 PSMC3IPQ9P2W1 217 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-204ENST00000409727 SOX13Q9UN79 622 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 RAI2Q9Y5P3 530 aa12.58□□□□□ -0.4
CHMP3-204ENST00000409727 FAM237BA0A1B0GVD1 139 aa12.57□□□□□ -0.4
CHMP3-204ENST00000409727 LOC285095A0A1B0GVY8 99 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms