RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 RBMX2Q9Y388 322 aaKnown RBP16.44■□□□□ 0.22
LSP1-204ENST00000406638 CORINQ9Y5Q5 1042 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 SNX9Q9Y5X1 595 aa16.44■□□□□ 0.22
LSP1-204ENST00000406638 VAPBO95292 243 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 MX2P20592 715 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 CYP3A5P20815 502 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 CNTFP26441 200 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 CRYBB1P53674 252 aaPredicted RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 PTK2BQ14289 1009 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 CCSAPQ6IQ19 270 aaPredicted RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 TTC33Q6PID6 262 aaPredicted RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 ST3GAL5Q9UNP4 418 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 GPC6Q9Y625 555 aaPredicted RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 SCN10AQ9Y5Y9 1956 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 A0A087WXM4 84 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 SMIM28A0A1B0GU29 152 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 SOBPA7XYQ1 873 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 TPD52L2O43399 206 aaKnown RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 MAGEA3P43357 314 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 NDST1P52848 882 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
LSP1-204ENST00000406638 ITGADQ13349 1161 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 PMS2P3Q13401 168 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 DPYSQ14117 519 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 DCAF4L1Q3SXM0 396 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 ZBTB49Q6ZSB9 765 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 CASP10Q92851 521 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 EFCAB1Q9HAE3 211 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 ITGB1BP2Q9UKP3 347 aa16.43■□□□□ 0.22
LSP1-204ENST00000406638 LSM1O15116 133 aaKnown RBP16.42■□□□□ 0.22
LSP1-204ENST00000406638 ERBB2P04626 1255 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 INHBBP09529 407 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 THPOP40225 353 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 NUMBP49757 651 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 BCAR1P56945 870 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 TFDP2Q14188 446 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 NR1D2Q14995 579 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 STILQ15468 1287 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
LSP1-204ENST00000406638 CES3Q6UWW8 571 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 NANOGNBQ7Z5D8 188 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 HERC6Q8IVU3 1022 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 CHPT1Q8WUD6 406 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 TANKQ92844 425 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 PGLYRP2Q96PD5 576 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 RNF157Q96PX1 679 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 CDH7Q9ULB5 785 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 TMEM98Q9Y2Y6 226 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.42■□□□□ 0.22
LSP1-204ENST00000406638 CILPO75339 1184 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 LTFP02788 710 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 RAB15P59190 212 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 GNA12Q03113 381 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 ZBTB6Q15916 424 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 NIPAL1Q6NVV3 410 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 SCYL2Q6P3W7 929 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 KCNT2Q6UVM3 1135 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 HACE1Q8IYU2 909 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 SLC15A4Q8N697 577 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 ANKRD60Q9BZ19 345 aa16.42■□□□□ 0.22
LSP1-204ENST00000406638 DUS2Q9NX74 493 aaKnown RBP16.42■□□□□ 0.22
LSP1-204ENST00000406638 LAMA2P24043 3122 aaKnown RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 SOCS2O14508 198 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 ZNF182P17025 639 aaPredicted RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 ABCG1P45844 678 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 SESN2P58004 480 aaPredicted RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 RBP5P82980 135 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 NHSL2Q5HYW2 709 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 TMEM214Q6NUQ4 689 aaKnown RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 XYLT1Q86Y38 959 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 MCUQ8NE86 351 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 KLHDC9Q8NEP7 349 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 SLCO4A1Q96BD0 722 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 CNDP1Q96KN2 507 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 DPEP3Q9H4B8 488 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 SPC25Q9HBM1 224 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 MGEA5O60502 916 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 GRAP2O75791 330 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 CLIC3O95833 236 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 JUNP05412 331 aaKnown RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 ERVK-10P10266 1014 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 APLP1P51693 650 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 TRAF2Q12933 501 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 RALGDSQ12967 914 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 C6orf183Q5T699 404 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 HMBOX1Q6NT76 420 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 SERINC5Q86VE9 423 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 FAM110BQ8TC76 370 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 RAET1EQ8TD07 263 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 FNIP1Q8TF40 1166 aa16.41■□□□□ 0.22
LSP1-204ENST00000406638 HEXIM2Q96MH2 286 aaKnown RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 NPLQ9BXD5 320 aaPredicted RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 ILKAPQ9H0C8 392 aaPredicted RBP16.41■□□□□ 0.22
LSP1-204ENST00000406638 C9IYK1 514 aa16.4■□□□□ 0.22
LSP1-204ENST00000406638 H0YJX3 145 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms