RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 SPTLC1O15269 473 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 TSPAN1O60635 241 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 C22orf31O95567 290 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 SLC35E2BP0CK96 405 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 KCNA5P22460 613 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 TRAF2Q12933 501 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 TTLL4Q14679 1199 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 RBM20Q5T481 1227 aaKnown RBP9.27□□□□□ -0.93
HPS4-203ENST00000402105 STXBP5Q5T5C0 1151 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 OGFOD2Q6N063 350 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 SETD3Q86TU7 594 aaPredicted RBP9.27□□□□□ -0.93
HPS4-203ENST00000402105 ZC3HC1Q86WB0 502 aaKnown RBP9.27□□□□□ -0.93
HPS4-203ENST00000402105 DCBLD1Q8N8Z6 715 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 TXNDC5Q8NBS9 432 aaKnown RBP9.27□□□□□ -0.93
HPS4-203ENST00000402105 OR52K2Q8NGK3 314 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 TKTL2Q9H0I9 626 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 ADNPQ9H2P0 1102 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 WDCPQ9H6R7 721 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 POLR1BQ9H9Y6 1135 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 CNOT6Q9ULM6 557 aaKnown RBP9.27□□□□□ -0.93
HPS4-203ENST00000402105 BTRCQ9Y297 605 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 CROCCQ5TZA2 2017 aa9.27□□□□□ -0.93
HPS4-203ENST00000402105 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 A0A1W2PPW3 197 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 NCF1BA6NI72 391 aaPredicted RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 NCF1CA8MVU1 366 aaPredicted RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 NOL3O60936 208 aaKnown RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 TGFB3P10600 412 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 HSPA8P11142 646 aaKnown RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 MTHFD1P11586 935 aaKnown RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 NCF1P14598 390 aaPredicted RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 PTPN9P43378 593 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 HSPA13P48723 471 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 C1QTNF8P60827 252 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 MAXP61244 160 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 VGLL4Q14135 290 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 TNFRSF12AQ9NP84 129 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 SPAG4Q9NPE6 437 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 OR12D3Q9UGF7 316 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 WARS2Q9UGM6 360 aaKnown RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 C1orf232A0A0U1RR37 186 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 ZBBXA8MT70 800 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 PGK1P00558 417 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 LGALS2P05162 132 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 PCNAP12004 261 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 GABRB3P28472 473 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 PRDX6P30041 224 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 ADCYAP1R1P41586 468 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 RAB10P61026 200 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 PHEXP78562 749 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 CDH17Q12864 832 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 BNIP3Q12983 259 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 ZNF789Q5FWF6 425 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 WSCD1Q658N2 575 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 GRAMD4Q6IC98 578 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 CHSY3Q70JA7 882 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 RNF168Q8IYW5 571 aaPredicted RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 LSMEM2Q8N112 164 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 TMEM102Q8N9M5 508 aaPredicted RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 KLRG1Q96E93 195 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 TXNRD2Q9NNW7 524 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 GPRC5DQ9NZD1 345 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 MTF2Q9Y483 593 aaPredicted RBP9.26□□□□□ -0.93
HPS4-203ENST00000402105 NRXN2Q9P2S2 1712 aa9.26□□□□□ -0.93
HPS4-203ENST00000402105 TRPC5OSA6NMA1 111 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 SDHDO14521 159 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 CLOCKO15516 846 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 HTRA2O43464 458 aaPredicted RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 GAS2O43903 313 aaKnown RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 TSPAN3O60637 253 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 BAIAP3O94812 1187 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 PENKP01210 267 aaPredicted RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 SNRPB2P08579 225 aaKnown RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 ZNF26P17031 533 aaPredicted RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 CD68P34810 354 aaPredicted RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 ADRA1BP35368 520 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 PRKCQQ04759 706 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 LBX2Q6XYB7 198 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 CUZD1Q86UP6 607 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 EXOC8Q8IYI6 725 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 CENPLQ8N0S6 344 aaPredicted RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 AFAP1L2Q8N4X5 818 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 SHCBP1Q8NEM2 672 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 DLG3Q92796 817 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 WNT8BQ93098 351 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 PLEKHG4BQ96PX9 1271 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 MTG1Q9BT17 334 aaPredicted RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 NAA50Q9GZZ1 169 aaKnown RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 CLK4Q9HAZ1 481 aaKnown RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 PIM2Q9P1W9 311 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 PCDHGA7Q9Y5G6 932 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 NUP205Q92621 2012 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 ANKRD31Q8N7Z5 1873 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 H3BRB1 525 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 PPP6CO00743 305 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 ANGPT2O15123 496 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 MAP4P27816 1152 aaKnown RBP9.25□□□□□ -0.93
HPS4-203ENST00000402105 SLC1A2P43004 574 aa9.25□□□□□ -0.93
HPS4-203ENST00000402105 MAGEA10P43363 369 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms