RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 PRAMEF20Q5VT98 475 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SUSD4Q5VX71 490 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CASC4Q6P4E1 433 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TRIM65Q6PJ69 517 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF852Q6ZMS4 543 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 UNC13DQ70J99 1090 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 NLRP9Q7RTR0 991 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HDXQ7Z353 690 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 REXO1L1PQ8IX06 675 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SCUBE3Q8IX30 993 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ANKFN1Q8N957 763 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF610Q8N9Z0 462 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 GLIS1Q8NBF1 620 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PIP4K2CQ8TBX8 421 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 STARD8Q92502 1023 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 RGMAQ96B86 450 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HDAC11Q96DB2 347 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZBED3Q96IU2 234 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HSH2DQ96JZ2 352 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 RPGRIP1Q96KN7 1286 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SUSD3Q96L08 255 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CNTNAP3BQ96NU0 1288 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 GORASP1Q9BQQ3 440 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HTATIP2Q9BUP3 242 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TUBB2BQ9BVA1 445 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 BTBD2Q9BX70 525 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 C1QTNF2Q9BXJ5 285 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CACNG6Q9BXT2 260 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CNTNAP3Q9BZ76 1288 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF576Q9H609 170 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CLK4Q9HAZ1 481 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 NOD2Q9HC29 1040 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SYTL2Q9HCH5 934 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 NGBQ9NPG2 151 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.99□□□□□ -1.772e-6■■□□□ 12.6
CLHC1-201ENST00000401408 PKD2L2Q9NZM6 624 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CNIH4Q9P003 139 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ANKMY1Q9P2S6 941 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PI4KBQ9UBF8 816 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SEC63Q9UGP8 760 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ARMCX3Q9UH62 379 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CHD6Q8TD26 2715 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PDE8BO95263 885 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TGFAP01135 160 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 AVPP01185 164 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ANXA1P04083 346 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PRKCBP05771 671 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 RETP07949 1114 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 NR3C2P08235 984 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ERVK-10P10266 1014 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PRPS2P11908 318 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ACPPP15309 386 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 NME2P22392 152 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 MAP4P27816 1152 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 EPHA8P29322 1005 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 GGCXP38435 758 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PTGIRP43119 386 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CBX5P45973 191 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CCR10P46092 362 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ARSEP51690 589 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 MLLT6P55198 1093 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TNFRSF17Q02223 184 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CSTF3Q12996 717 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF177Q13360 481 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ADAM9Q13443 819 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HERC3Q15034 1050 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 KARSQ15046 597 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CHRNA6Q15825 494 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 BCL2A1Q16548 175 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HIF1AQ16665 826 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 FAM187BQ17R55 369 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PCGF3Q3KNV8 242 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 EXOSC6Q5RKV6 272 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 C10orf120Q5SQS8 335 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PRAMEF18Q5VWM3 479 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 DCAF15Q66K64 600 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CCDC62Q6P9F0 684 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TUBA3EQ6PEY2 450 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 USP17L6PQ6QN14 398 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF813Q6ZN06 617 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 RBM43Q6ZSC3 357 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 OVCH1Q7RTY7 1134 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 LAPTM4BQ86VI4 370 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 DNAAF5Q86Y56 855 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 STX12Q86Y82 276 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 KSR1Q8IVT5 923 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TMEM192Q8IY95 271 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 CISD2Q8N5K1 135 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PIK3C3Q8NEB9 887 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 AGBL3Q8NEM8 1001 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 BBS1Q8NFJ9 593 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ADCY4Q8NFM4 1077 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 OR6Y1Q8NGX8 325 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF384Q8TF68 577 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 DCAF4Q8WV16 495 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 DNAJA4Q8WW22 397 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SLC9A6Q92581 669 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms