RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RAD51BO15315 384 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 TNFSF14O43557 240 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 PRAMEF11O60813 436 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 PAK4O96013 591 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 CYP1A2P05177 515 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 ITGAVP06756 1048 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 THEGLP0DJG4 465 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 HNRNPA2B1P22626 353 aaKnown RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 HCAR3P49019 387 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 CLDN2P57739 230 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 RHOAP61586 193 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 RPS21P63220 83 aaKnown RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 DPYSQ14117 519 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 ACAP1Q15027 740 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 ST3GAL2Q16842 350 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 PPP6R3Q5H9R7 873 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 KIAA1161Q6NSJ0 714 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 GDPD4Q6W3E5 623 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 GCNT7Q6ZNI0 430 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 ABI3BPQ7Z7G0 1075 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 NPWQ8N729 165 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 ARHGEF26Q96DR7 871 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 GDAP1L1Q96MZ0 367 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 OSBPL1AQ9BXW6 950 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 DONSONQ9NYP3 566 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 UBA2Q9UBT2 640 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.16
ATG4B-203ENST00000400772 ITM2BQ9Y287 266 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 CHD8Q9HCK8 2581 aa16.08■□□□□ 0.16
ATG4B-203ENST00000400772 IGLON5A6NGN9 336 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 AREL1O15033 823 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 YKT6O15498 198 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 IGSF6O95976 241 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 PROS1P07225 676 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 ITIH2P19823 946 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 AKT2P31751 481 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 ARRB1P49407 418 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-203ENST00000400772 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-203ENST00000400772 TXNRD3NBQ6F5E7 133 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 ALKBH5Q6P6C2 394 aaKnown RBP16.07■□□□□ 0.16
ATG4B-203ENST00000400772 ARHGAP36Q6ZRI8 547 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 TP53INP2Q8IXH6 220 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 SLC22A18ASQ8N1D0 253 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 OXR1Q8N573 874 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 OR13H1Q8NG92 308 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 RAB7BQ96AH8 199 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 EXOC2Q96KP1 924 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 KLF6Q99612 283 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-203ENST00000400772 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 C1QTNF2Q9BXJ5 285 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 CPEB1Q9BZB8 566 aaKnown RBP16.07■□□□□ 0.16
ATG4B-203ENST00000400772 HS3ST3A1Q9Y663 406 aa16.07■□□□□ 0.16
ATG4B-203ENST00000400772 MAP1BP46821 2468 aaKnown RBP16.07■□□□□ 0.16
ATG4B-203ENST00000400772 POM121BA6NF01 834 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 ARHGAP42A6NI28 874 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 GOLGA8CPA6NN73 597 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 DAPK3O43293 454 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 TSPAN6O43657 245 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 BUB1BO60566 1050 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-203ENST00000400772 RARAP10276 462 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 TIMP2P16035 220 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 PIGHQ14442 188 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-203ENST00000400772 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 DPYSL2Q16555 572 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 SMTNL2Q2TAL5 461 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 BOLA3Q53S33 107 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 LRRC73Q5JTD7 316 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 CCDC122Q5T0U0 273 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 POLNQ7Z5Q5 900 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 TTC7BQ86TV6 843 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 EID2Q8N6I1 236 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 NIPA2Q8N8Q9 360 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 KDF1Q8NAX2 398 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-203ENST00000400772 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-203ENST00000400772 NUP85Q9BW27 656 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 GPR27Q9NS67 375 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 ETNK2Q9NVF9 386 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 KLHL11Q9NVR0 708 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■□□□ 12.3
ATG4B-203ENST00000400772 FRYQ5TBA9 3013 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 PLXNB3Q9ULL4 1909 aa16.06■□□□□ 0.16
ATG4B-203ENST00000400772 ARID1BQ8NFD5 2236 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-203ENST00000400772 SDC3O75056 442 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 PIGNO95427 931 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
ATG4B-203ENST00000400772 RGRP47804 291 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 ZNF135P52742 658 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-203ENST00000400772 SLC25A11Q02978 314 aaKnown RBP16.05■□□□□ 0.16
ATG4B-203ENST00000400772 RAD51Q06609 339 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 ASTE1Q2TB18 679 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-203ENST00000400772 INAVAQ3KP66 663 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 CCNI2Q6ZMN8 369 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-203ENST00000400772 Q6ZSR6 202 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 ZSCAN30Q86W11 494 aa16.05■□□□□ 0.16
ATG4B-203ENST00000400772 SLC25A45Q8N413 288 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms