RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SMURF2Q9HAU4 748 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 GABBR1Q9UBS5 961 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 FETUBQ9UGM5 382 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CTSEP14091 401 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CYP11B1P15538 503 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 RPL10AP62906 217 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 DYNLL1P63167 89 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 MVKQ03426 396 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 MYBPC3Q14896 1274 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 SPATS1Q496A3 300 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 HECTD3Q5T447 861 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 STRIP1Q5VSL9 837 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 SVOPLQ8N434 492 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 UPB1Q9UBR1 384 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 ST3GAL5Q9UNP4 418 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CAMSAP1Q5T5Y3 1602 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 TRPM1Q7Z4N2 1603 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 PGRMC2O15173 223 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ITGA10O75578 1167 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ITGA7Q13683 1181 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 C6orf52Q5T4I8 152 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 GALNT18Q6P9A2 607 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SDR16C5Q8N3Y7 309 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 TOR1AIP2Q8NFQ8 470 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 PUS3Q9BZE2 481 aaKnown RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 CXorf21Q9HAI6 301 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SLC38A7Q9NVC3 462 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD8-201ENST00000399982 PTGFRNQ9P2B2 879 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ATF5Q9Y2D1 282 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 SLC2A4P14672 509 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 NPR2P20594 1047 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 PSMA1P25786 263 aaKnown RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 PKN1Q16512 942 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SMTNL2Q2TAL5 461 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 CLNKQ7Z7G1 428 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 FSTL5Q8N475 847 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 ZNF248Q8NDW4 579 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ACSS3Q9H6R3 686 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 UBQLN1Q9UMX0 589 aaKnown RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 GRIP1Q9Y3R0 1128 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 HEG1Q9ULI3 1381 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 NCANO14594 1321 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 MDFIC2A0A1B0GVS7 189 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 PLA2G6O60733 806 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 H6PDO95479 791 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 FAM153BP0C7A2 387 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 IDO1P14902 403 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 HPCAL1P37235 193 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SLC9A3P48764 834 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 FAM153CQ494X1 144 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 TCEAL6Q6IPX3 200 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SPATA9Q9BWV2 254 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 MTMR12Q9C0I1 747 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 CLPBQ9H078 707 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 XKR8Q9H6D3 395 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 HOXC10Q9NYD6 342 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 AGAP1Q9UPQ3 857 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ENTPD4Q9Y227 616 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 FAM172BPA6NC97 362 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 NDUFS2O75306 463 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 HLA-DRAP01903 254 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ITGAVP06756 1048 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ADRA1DP25100 572 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 PCSK1P29120 753 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 MAGEA12P43365 314 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 GABRB2P47870 512 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 NRF1Q16656 503 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 PAK6Q9NQU5 681 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 SPATA7Q9P0W8 599 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 FBXO9Q9UK97 447 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 IKZF3Q9UKT9 509 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 HIF3AQ9Y2N7 669 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 OTOL1A6NHN0 477 aaPredicted RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 PLIN3O60664 434 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SH3BGRLO75368 114 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 GLRBP48167 497 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 MOGQ16653 247 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ZNF549Q6P9A3 640 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SIPA1Q96FS4 1042 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 MORF4L1Q9UBU8 362 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 GLS2Q9UI32 602 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ABCA9Q8IUA7 1624 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 ISPDA4D126 451 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 H7C2Y5 167 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 OR10H2O60403 315 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 NOL4O94818 638 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 GJB6O95452 261 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 WDR72Q3MJ13 1102 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 GPAT3Q53EU6 434 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SMIM5Q71RC9 77 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 TOP1MTQ969P6 601 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 SLC22A4Q9H015 551 aa8.44□□□□□ -1.06
CHD8-201ENST00000399982 TRMT13Q9NUP7 481 aaKnown RBP8.44□□□□□ -1.06
CHD8-201ENST00000399982 ABHD14A-ACY1A0A1B0GW23 586 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 USP17L3A6NCW0 530 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms