RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 AURKCQ9UQB9 309 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 A0A1W2PPW3 197 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 EEF2KO00418 725 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 MRASO14807 208 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 PGK1P00558 417 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 ARF4P18085 180 aaPredicted RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 GABRB3P28472 473 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 HMOX2P30519 316 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 SLC7A2P52569 658 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 MPP1Q00013 466 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 PPP4R4Q6NUP7 873 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 STRADAQ7RTN6 431 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 DHFR2Q86XF0 187 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 TXNDC5Q8NBS9 432 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 SPPL2BQ8TCT7 592 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 TOP1MTQ969P6 601 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 OSBPL2Q9H1P3 480 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 HIPK3Q9H422 1215 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 TNFRSF12AQ9NP84 129 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 ADARB2Q9NS39 739 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 SETD4Q9NVD3 440 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 ACOT9Q9Y305 439 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 FAM155AB1AL88 458 aaPredicted RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 SRP72O76094 671 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 CD247P20963 164 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 ATP6V1B2P21281 511 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 PSMD8P48556 350 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 PFKPQ01813 784 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 BST2Q10589 180 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 TRAP1Q12931 704 aaKnown RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 CTBP1Q13363 440 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 OGFOD2Q6N063 350 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 LYSMD3Q7Z3D4 306 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 DENND6AQ8IWF6 608 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 TTC39CQ8N584 583 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 ANKRD52Q8NB46 1076 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 RNF169Q8NCN4 708 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
APOB-202ENST00000399256 TCF12Q99081 682 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 RHOJQ9H4E5 214 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 CXorf21Q9HAI6 301 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 SLC38A7Q9NVC3 462 aa14.13□□□□□ -0.15
APOB-202ENST00000399256 FAM72CH0Y354 149 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 UBDO15205 165 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 XPOTO43592 962 aaKnown RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 CBFA2T3O75081 653 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 AHSGP02765 367 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 PORP16435 677 aaPredicted RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 NFKB1P19838 968 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 CD68P34810 354 aaPredicted RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 CSRP3P50461 194 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 C1QTNF8P60827 252 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 PMS2P3Q13401 168 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 FAM72AQ5TYM5 149 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 FAM72DQ6L9T8 149 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 TMEM26Q6ZUK4 368 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 FAM72BQ86X60 149 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 NT5DC4Q86YG4 428 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 ANKFN1Q8N957 763 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 COX4I2Q96KJ9 171 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 NPLQ9BXD5 320 aaPredicted RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 DNAI2Q9GZS0 605 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 NAA50Q9GZZ1 169 aaKnown RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 RPF2Q9H7B2 306 aaKnown RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 RCOR3Q9P2K3 495 aaPredicted RBP14.12□□□□□ -0.15
APOB-202ENST00000399256 CD300AQ9UGN4 299 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 CROTQ9UKG9 612 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 KANSL1LA0AUZ9 987 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 H3BMQ9 156 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 COL6A2P12110 1019 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 CYP2B6P20813 491 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 LRPAP1P30533 357 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 MATKP42679 507 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 MAPK10P53779 464 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 ZBTB17Q13105 803 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 FGD3Q5JSP0 725 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 ZNF280DQ6N043 979 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 MFSD6LQ8IWD5 586 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 COPS5Q92905 334 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 COG8Q96MW5 612 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 IL1RL2Q9HB29 575 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 SCN1AP35498 2009 aa14.12□□□□□ -0.15
APOB-202ENST00000399256 EVPLQ92817 2033 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 DLGAP1O14490 977 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 VTNP04004 478 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 SNRPB2P08579 225 aaKnown RBP14.11□□□□□ -0.15
APOB-202ENST00000399256 SQLEQ14534 574 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 MAPRE2Q15555 327 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 TGFBIQ15582 683 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 AARS2Q5JTZ9 985 aaKnown RBP14.11□□□□□ -0.15
APOB-202ENST00000399256 OTUD1Q5VV17 481 aaPredicted RBP14.11□□□□□ -0.15
APOB-202ENST00000399256 CYGBQ8WWM9 190 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 FBXL20Q96IG2 436 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 ADI1Q9BV57 179 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 MUC3BQ9H195 1237 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 UPF3AQ9H1J1 476 aaKnown RBP14.11□□□□□ -0.15
APOB-202ENST00000399256 NCKIPSDQ9NZQ3 722 aa14.11□□□□□ -0.15
APOB-202ENST00000399256 SELENONQ9NZV5 590 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms