RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RASA4BC9J798 803 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 KRIT1O00522 736 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 RASA4O43374 803 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 AP1G1O43747 822 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 TMCC1O94876 653 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 MYBL1P10243 752 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 SKILP12757 684 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 EPHA8P29322 1005 aaPredicted RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 UBASH3AP57075 661 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 RPS21P63220 83 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 RAD51Q06609 339 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 MYLK3Q32MK0 819 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 INO80DQ53TQ3 878 aaPredicted RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 ZNF805Q5CZA5 627 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 ERMARDQ5T6L9 678 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 SEL1L3Q68CR1 1132 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 KIAA1161Q6NSJ0 714 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 PARS2Q7L3T8 475 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 SPATS2Q86XZ4 545 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 DNAAF5Q86Y56 855 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 UMODL1-AS1Q8N2C9 162 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 RAB7BQ96AH8 199 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 ZNF653Q96CK0 615 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 HMCESQ96FZ2 354 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 FEM1CQ96JP0 617 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 EIF3CQ99613 913 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 MRPL47Q9HD33 250 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 ZFR2Q9UPR6 939 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 FADS3Q9Y5Q0 445 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 BZW2Q9Y6E2 419 aaKnown RBP13.62□□□□□ -0.23
VCX3A-202ENST00000398729 SCINQ9Y6U3 715 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 NAV2Q8IVL1 2488 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 IGSF6O95976 241 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 PRB1P04280 392 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 UGT2B4P06133 528 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 THEGLP0DJG4 465 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 GKP32189 559 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 RHOAP61586 193 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
VCX3A-202ENST00000398729 SERINC3Q13530 473 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 TMEM259Q4ZIN3 620 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
VCX3A-202ENST00000398729 VPS36Q86VN1 386 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 FAM174AQ8TBP5 190 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 ARHGEF26Q96DR7 871 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 SLC17A9Q9BYT1 436 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 KLC2Q9H0B6 622 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
VCX3A-202ENST00000398729 FZD3Q9NPG1 666 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 MYO1AQ9UBC5 1043 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 PCSK1NQ9UHG2 260 aa13.61□□□□□ -0.23
VCX3A-202ENST00000398729 COL5A1P20908 1838 aaPredicted RBP13.61□□□□□ -0.23
VCX3A-202ENST00000398729 C16orf96A6NNT2 1141 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 EEF2KO00418 725 aaKnown RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 NEMP1O14524 444 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 DAPK3O43293 454 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 TSPAN6O43657 245 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 LDOC1O95751 146 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 PBX1P40424 430 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 NDST2P52849 883 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 BNIP3Q12983 259 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 SMAD1Q15797 465 aaKnown RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 CCDC157Q569K6 752 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 ATXN7L2Q5T6C5 722 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 GDPD4Q6W3E5 623 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 PSTKQ8IV42 348 aaKnown RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 GALNT15Q8N3T1 639 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 EID2Q8N6I1 236 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 ARFGAP1Q8N6T3 406 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 SYN2Q92777 582 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 IQCDQ96DY2 449 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 CNDP2Q96KP4 475 aaKnown RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 PEBP4Q96S96 227 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 SNRNP25Q9BV90 132 aaKnown RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 TRPM6Q9BX84 2022 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 CALN1Q9BXU9 219 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 ISCUQ9H1K1 167 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 LRRC19Q9H756 370 aa13.6□□□□□ -0.23
VCX3A-202ENST00000398729 UBA2Q9UBT2 640 aaPredicted RBP13.6□□□□□ -0.23
VCX3A-202ENST00000398729 ATMQ13315 3056 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 ARHGAP42A6NI28 874 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 A6NNZ2 444 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 ENC1O14682 589 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 PAK4O96013 591 aaPredicted RBP13.59□□□□□ -0.23
VCX3A-202ENST00000398729 SERPING1P05155 500 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 MIPP30301 263 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 ABL2P42684 1182 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 ZNF135P52742 658 aaPredicted RBP13.59□□□□□ -0.23
VCX3A-202ENST00000398729 CLDN2P57739 230 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 SGCGQ13326 291 aa13.59□□□□□ -0.23
VCX3A-202ENST00000398729 CA9Q16790 459 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms