RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TMEM259Q4ZIN3 620 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 BRMS1LQ5PSV4 323 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LDLRAP1Q5SW96 308 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ERMARDQ5T6L9 678 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 FAAH2Q6GMR7 532 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CHSY3Q70JA7 882 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ADHFE1Q8IWW8 467 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RGL4Q8IZJ4 473 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LRRC52Q8N7C0 313 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ZBTB8BQ8NAP8 495 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 KLHL23Q8NBE8 558 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 OR56A4Q8NGH8 313 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LRIG1Q96JA1 1093 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MAGEB18Q96M61 343 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ARHGAP9Q9BRR9 750 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 FAM213AQ9BRX8 229 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PITPNM3Q9BZ71 974 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SLC29A3Q9BZD2 475 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 FHDC1Q9C0D6 1143 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 INTS10Q9NVR2 710 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ATXN10Q9UBB4 475 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 AGAP1Q9UPQ3 857 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SCN1AP35498 2009 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TEX13CA0A0J9YWL9 993 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SOBPA7XYQ1 873 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PEX12O00623 359 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CLDN11O75508 207 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 UPP2O95045 317 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MMP13P45452 471 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CCNHP51946 323 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 OSTNP61366 133 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ORC1Q13415 861 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MKRN4PQ13434 485 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 C2CD6Q53TS8 623 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 DCP2Q8IU60 420 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 SLC44A2Q8IWA5 706 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 CLEC4FQ8N1N0 589 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 HIPK4Q8NE63 616 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 OR6C4Q8NGE1 309 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 KLHDC4Q8TBB5 520 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ZNF594Q96JF6 807 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 MCEEQ96PE7 176 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 NELL2Q99435 816 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ELAC2Q9BQ52 826 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 NUSAP1Q9BXS6 441 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 TDRD1Q9BXT4 1180 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 NCOA5Q9HCD5 579 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 TRPV5Q9NQA5 729 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ANGPT4Q9Y264 503 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 A0A0X1KG70 313 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ANKDD1BA6NHY2 528 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SEPT4O43236 478 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 EPN2O95208 641 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ZBTB7AO95365 584 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RB1P06400 928 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SNRPAP09012 282 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 VDRP11473 427 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 NPR3P17342 541 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RPL10P27635 214 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 IL12BP29460 328 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 GRK5P34947 590 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TBX4P57082 545 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 OTUD4Q01804 1114 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 MFSD10Q14728 455 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ZKSCAN8Q15776 578 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 MTX3Q5HYI7 312 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 KYAT3Q6YP21 454 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ASB18Q6ZVZ8 466 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 AMIGO1Q86WK6 493 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 DNAAF5Q86Y56 855 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 NAT16Q8N8M0 369 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PIGOQ8TEQ8 1089 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHD9-202ENST00000398510 KIFC1Q9BW19 673 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 BLZF1Q9H2G9 400 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ARHGEF3Q9NR81 526 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MORF4L1Q9UBU8 362 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 AP4E1Q9UPM8 1137 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 MRPS23Q9Y3D9 190 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ARID1BQ8NFD5 2236 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 HEATR1Q9H583 2144 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 FAM221BA6H8Z2 402 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 DUXAA6NLW8 204 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 PLD2O14939 933 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 SLC16A4O15374 487 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LILRB3O75022 631 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 COQ9O75208 318 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 ENO3P13929 434 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 AMD1P17707 334 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 HCAR3P49019 387 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CRYBB1P53674 252 aaPredicted RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 ERVK-21P61565 698 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 CSHL1Q14406 222 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 DSC3Q14574 896 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 EOGTQ5NDL2 527 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 RPL13AP3Q6NVV1 102 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 LRRC69Q6ZNQ3 347 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 TSHZ1Q6ZSZ6 1077 aa2.75□□□□□ -1.97
CHD9-202ENST00000398510 YTHDF3Q7Z739 585 aaKnown RBP2.75□□□□□ -1.97
CHD9-202ENST00000398510 LIX1LQ8IVB5 337 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms