RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 TRIM43BA6NCK2 446 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 SLCO1B7G3V0H7 640 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 CCDC22O60826 627 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 NDST3O95803 873 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 HNRNPA1P09651 372 aaKnown RBP eCLIP7.46□□□□□ -1.21
RGPD1-201ENST00000398193 ERVK-10P10266 1014 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 TYK2P29597 1187 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 DCLK2Q8N568 766 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 BRSK1Q8TDC3 778 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 TRIM43Q96BQ3 446 aaPredicted RBP7.46□□□□□ -1.21
RGPD1-201ENST00000398193 VPS39Q96JC1 886 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 WWP1Q9H0M0 922 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 MYLK2Q9H1R3 596 aa7.46□□□□□ -1.21
RGPD1-201ENST00000398193 IARS2Q9NSE4 1012 aaKnown RBP7.46□□□□□ -1.21
RGPD1-201ENST00000398193 NLE1Q9NVX2 485 aaPredicted RBP7.46□□□□□ -1.21
RGPD1-201ENST00000398193 AGO1Q9UL18 857 aaKnown RBP7.46□□□□□ -1.21
RGPD1-201ENST00000398193 ZNF638Q14966 1978 aaKnown RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 CHD5Q8TDI0 1954 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 TRAV19A0A0A6YYK7 116 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 C5orf67F2Z3F1 127 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 PRRG1O14668 218 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 UGT1A9O60656 530 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 RPP40O75818 363 aaKnown RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 CNTN5O94779 1100 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 CR2P20023 1033 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 ATN1P54259 1190 aaPredicted RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 STX3Q13277 289 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 DMC1Q14565 340 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 MROH9Q5TGP6 573 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 FAM45BPQ6NSW5 357 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 DNAJB7Q7Z6W7 309 aaPredicted RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 CCDC33Q8N5R6 958 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 CCDC63Q8NA47 563 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 FAM45AQ8TCE6 357 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 PPP4R1Q8TF05 950 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 ZFRQ96KR1 1074 aaKnown RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 PRICKLE1Q96MT3 831 aaPredicted RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 TCF12Q99081 682 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 CEP41Q9BYV8 373 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 UGT1A7Q9HAW7 530 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 UGT1A10Q9HAW8 530 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 UGT1A8Q9HAW9 530 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 EMCNQ9ULC0 261 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 A0A1W2PQ67 120 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 ADAM12O43184 909 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 SERPINF2P08697 491 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 HOXD9P28356 352 aaPredicted RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 PRDX6P30041 224 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 RAB10P61026 200 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 MPPE1Q53F39 396 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 N4BP2L1Q5TBK1 243 aaPredicted RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 FSTL4Q6MZW2 842 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 LILRA6Q6PI73 481 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 PTPRN2Q92932 1015 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
RGPD1-201ENST00000398193 B3GALT6Q96L58 329 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 KLHL5Q96PQ7 755 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 TMEM106CQ9BVX2 250 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 ZMYND15Q9H091 742 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 SCUBE2Q9NQ36 999 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 TLK1Q9UKI8 766 aa7.46□□□□□ -1.22
RGPD1-201ENST00000398193 HSPA8P11142 646 aaKnown RBP7.45□□□□□ -1.22
RGPD1-201ENST00000398193 CD86P42081 329 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 AP1S1P61966 158 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 RIPK1Q13546 671 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 GRM3Q14832 879 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 LYPLAL1Q5VWZ2 237 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 AFTPHQ6ULP2 937 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 DCAF4L2Q8NA75 395 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 LRRC37BQ96QE4 947 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 YME1L1Q96TA2 773 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 C1QTNF1Q9BXJ1 281 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 NDFIP2Q9NV92 336 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 DNMT3BQ9UBC3 853 aaKnown RBP7.45□□□□□ -1.22
RGPD1-201ENST00000398193 COPG2Q9UBF2 871 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 VTI1BQ9UEU0 232 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 NT5C1B-RDH14C9J2C7 533 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 F8W8V4 182 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 INSIG1O15503 277 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 ATP9BO43861 1147 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 NPHS1O60500 1241 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 FGBP02675 491 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 LRG1P02750 347 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 MBL2P11226 248 aaPredicted RBP7.45□□□□□ -1.22
RGPD1-201ENST00000398193 ARFIP2P53365 341 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 FPGSQ05932 587 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 SIRPB2Q5JXA9 342 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 SH2D4BQ5SQS7 431 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 SYCP2LQ5T4T6 812 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 UBE2Q1Q7Z7E8 422 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 MIB1Q86YT6 1006 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 PLPP6Q8IY26 295 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 MRPS31Q92665 395 aaKnown RBP7.45□□□□□ -1.22
RGPD1-201ENST00000398193 SKA1Q96BD8 255 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 TUBGCP5Q96RT8 1024 aa7.45□□□□□ -1.22
RGPD1-201ENST00000398193 ADGRE3Q9BY15 652 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms