RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 ZNF395Q9H8N7 513 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 PREBQ9HCU5 417 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 ACSS2Q9NR19 701 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 ABCB10Q9NRK6 738 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 RCOR3Q9P2K3 495 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 KLHL3Q9UH77 587 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 BTBD3Q9Y2F9 522 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 A0A0J9YYE9 177 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 F5H5T6 163 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 PCNAP12004 261 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 SCNN1BP51168 640 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 KRT33BQ14525 404 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 FSTL4Q6MZW2 842 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 IL27RAQ6UWB1 636 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 ARHGAP36Q6ZRI8 547 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 NANOGNBQ7Z5D8 188 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 POC5Q8NA72 575 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 SMARCD1Q96GM5 515 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.62
HPS4-202ENST00000398145 WDR12Q9GZL7 423 aaKnown RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 RERGLQ9H628 205 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 PNPLA8Q9NP80 782 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 CACNA2D2Q9NY47 1150 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 UGT1A9O60656 530 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 SEC22BO75396 215 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 RECQL4O94761 1208 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 IDO1P14902 403 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 TCF4P15884 667 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 CYP2C18P33260 490 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 GSSP48637 474 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 EFEMP1Q12805 493 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 ZNF177Q13360 481 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 SYTL3Q4VX76 610 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 MILR1Q7Z6M3 343 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 GPSM1Q86YR5 675 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 CAPSLQ8WWF8 208 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 LRTOMTQ8WZ04 291 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 SENP6Q9GZR1 1112 aaPredicted RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 UGT1A7Q9HAW7 530 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 UGT1A10Q9HAW8 530 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 UGT1A8Q9HAW9 530 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 TRNAU1APQ9NX07 287 aaKnown RBP11.15□□□□□ -0.62
HPS4-202ENST00000398145 TMCC3Q9ULS5 477 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 KAT6AQ92794 2004 aa11.15□□□□□ -0.62
HPS4-202ENST00000398145 F8W810 466 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 RAD51BO15315 384 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 CCNT2O60583 730 aaKnown RBP11.15□□□□□ -0.63
HPS4-202ENST00000398145 TSPAN3O60637 253 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 SERPINI2O75830 405 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 CPSF4O95639 269 aaKnown RBP11.15□□□□□ -0.63
HPS4-202ENST00000398145 ALOX5P09917 674 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 SLC11A2P49281 568 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 RAB15P59190 212 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.63
HPS4-202ENST00000398145 MSS51Q4VC12 460 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 PSMA8Q8TAA3 256 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 PCDH19Q8TAB3 1148 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 FAM45AQ8TCE6 357 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 SPPL2AQ8TCT8 520 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 SKA1Q96BD8 255 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 MFSD3Q96ES6 412 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 ADGRE3Q9BY15 652 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 NUAK2Q9H093 628 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 COQ10BQ9H8M1 238 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 STMN3Q9NZ72 180 aa11.15□□□□□ -0.63
HPS4-202ENST00000398145 PNMA8BQ9ULN7 279 aaPredicted RBP11.15□□□□□ -0.63
HPS4-202ENST00000398145 KLHL33A6NCF5 533 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 TK2O00142 265 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 TAF4O00268 1085 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 NADKO95544 446 aaPredicted RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 PTPN1P18031 435 aaKnown RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 RRM2P31350 389 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 SOAT1P35610 550 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 ARHGEF7Q14155 803 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 GRIK4Q16099 956 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 FSCN1Q16658 493 aaKnown RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 SLC25A52Q3SY17 297 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 ZYG11AQ6WRX3 759 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 ZNF410Q86VK4 478 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 SPPL2CQ8IUH8 684 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 LMO3Q8TAP4 145 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 FBXL18Q96ME1 805 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 VWA7Q9Y334 891 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 IPO13O94829 963 aaKnown RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 ZNF12P17014 697 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 ITGALP20701 1170 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 S100A3P33764 101 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 SLC5A3P53794 718 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 NRLP54845 237 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 OXCT1P55809 520 aa11.14□□□□□ -0.63
HPS4-202ENST00000398145 RPL26P61254 145 aaKnown RBP11.14□□□□□ -0.63
HPS4-202ENST00000398145 SNAPC2Q13487 334 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms