RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ALG14Q96F25 216 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 PITPNM3Q9BZ71 974 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 TRABDQ9H4I3 376 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 POMKQ9H5K3 350 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 EIF2B3Q9NR50 452 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 UBA2Q9UBT2 640 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 ACTL7AQ9Y615 435 aa19.6■□□□□ 0.73
PDLIM2-204ENST00000397760 E7ESA3 106 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 CACNG3O60359 315 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 SNAP91O60641 907 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 WDR4P57081 412 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 NCALDP61601 193 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 CDK16Q00536 496 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 DHCR24Q15392 516 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 EML3Q32P44 896 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 FNBP1LQ5T0N5 605 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 TRIM68Q6AZZ1 485 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 APCDD1Q8J025 514 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 ATP11CQ8NB49 1132 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 FCRL5Q96RD9 977 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 THG1LQ9NWX6 298 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 MARK1Q9P0L2 795 aa19.59■□□□□ 0.73
PDLIM2-204ENST00000397760 ATP5HO75947 161 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 ATP6V1G2O95670 118 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 NQO1P15559 274 aaKnown RBP19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 CD70P32970 193 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 TNK2Q07912 1038 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 ITKQ08881 620 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 PDK4Q16654 411 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 KLHL38Q2WGJ6 581 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 SPDYAQ5MJ70 313 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 PDIK1LQ8N165 341 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 DCAF4L2Q8NA75 395 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 SMRP1Q8NCR6 262 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 ASIC4Q96FT7 647 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 MLPHQ9BV36 600 aaPredicted RBP19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 FRMD8Q9BZ67 464 aaPredicted RBP19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 VPS37BQ9H9H4 285 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 UBP1Q9NZI7 540 aa19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.58■□□□□ 0.73
PDLIM2-204ENST00000397760 REV3LO60673 3130 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ZMPSTE24O75844 475 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 LAMP2P13473 410 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 GEMIN4P57678 1058 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 SARNPP82979 210 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ARF5P84085 180 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 PDIA2Q13087 525 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 SLC12A1Q13621 1099 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ZNF235Q14590 738 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 RFTN1Q14699 578 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ZBED8Q8IZ13 594 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 BBS5Q8N3I7 341 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 SPATA22Q8NHS9 363 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 E2F7Q96AV8 911 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ALKBH8Q96BT7 664 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 OXNAD1Q96HP4 312 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ZFYVE19Q96K21 471 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 LMLNQ96KR4 655 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 C2orf49Q9BVC5 232 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ECT2Q9H8V3 914 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 ABCB8Q9NUT2 735 aa19.58■□□□□ 0.72
PDLIM2-204ENST00000397760 TRIOBPQ9H2D6 2365 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 ZWINTO95229 277 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 AP2A1O95782 977 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 CYP17A1P05093 508 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 ALADP13716 330 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 HLA-FP30511 346 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 FOXN2P32314 431 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 MAXP61244 160 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 MTM1Q13496 603 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 MSS51Q4VC12 460 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 CGB2Q6NT52 195 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 VITQ6UXI7 678 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 LINGO4Q6UY18 593 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 PGBD5Q8N414 524 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 ZNF557Q8N988 423 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 DHRS4Q9BTZ2 278 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 SLC25A51Q9H1U9 297 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 CD248Q9HCU0 757 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 ARHGEF3Q9NR81 526 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 SEPT3Q9UH03 358 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 VPS51Q9UID3 782 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 CD207Q9UJ71 328 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 AAR2Q9Y312 384 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 SHROOM3Q8TF72 1996 aa19.57■□□□□ 0.72
PDLIM2-204ENST00000397760 NUP210Q8TEM1 1887 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 ERI2A8K979 691 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 PSMD3O43242 534 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 TYROBPO43914 113 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 AVILO75366 819 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 ANXA9O76027 345 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 ADH1CP00326 375 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 ARSAP15289 507 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 EZRP15311 586 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 KRT15P19012 456 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 GRIA1P42261 906 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 PLK1P53350 603 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 PLEKHG6Q3KR16 790 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 BBS9Q3SYG4 887 aa19.56■□□□□ 0.72
PDLIM2-204ENST00000397760 HP1BP3Q5SSJ5 553 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms