RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FSD1LQ9BXM9 530 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 PIEZO1Q92508 2521 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 VAV1P15498 845 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 PTGER3P43115 390 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 STX5Q13190 355 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 DENND5AQ6IQ26 1287 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 LLGL2Q6P1M3 1020 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 MAELQ96JY0 434 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 LATS2Q9NRM7 1088 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 PHTF1Q9UMS5 762 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ZFP37Q9Y6Q3 630 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 E9PAM4 449 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 TCF4P15884 667 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ACAP2Q15057 778 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 CLLU1OSQ5K130 101 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ANKRD22Q5VYY1 191 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 TBC1D1Q86TI0 1168 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 KCNMB4Q86W47 210 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ENDOVQ8N8Q3 282 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 C2CD4AQ8NCU7 369 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 C10orf82Q8WW14 230 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 NUDCD1Q96RS6 583 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 WDR83Q9BRX9 315 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 DRC3Q9H069 523 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 MAGEE1Q9HCI5 957 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 SMOXQ9NWM0 555 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 RP1P56715 2156 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 PSMD11O00231 422 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HAUS5O94927 633 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 BDNFP23560 247 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ELF1P32519 619 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 CDKL1Q00532 357 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 LIPMQ5VYY2 423 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HTR3DQ70Z44 454 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 TTC8Q8TAM2 541 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 CCDC97Q96F63 343 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 LGMNQ99538 433 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HOXD9P28356 352 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 EIF2DP41214 584 aaKnown RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 EPHB3P54753 998 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF235Q14590 738 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 OTOAQ7RTW8 1153 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 LRRTM3Q86VH5 581 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 PCDH20Q8N6Y1 951 aaKnown RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 MIPOL1Q8TD10 442 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 PSMG2Q969U7 264 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 FBRSQ9HAH7 460 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 BCCIPQ9P287 314 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 TARM1B6A8C7 271 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 POC1B-GALNT4F8VUJ3 575 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CD48P09326 243 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CTSAP10619 480 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 PNLIPRP1P54315 467 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 BTKQ06187 659 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 BST1Q10588 318 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CDO1Q16878 200 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 TTLL9Q3SXZ7 439 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 TSTD2Q5T7W7 516 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 FBXL22Q6P050 247 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 NEK10Q6ZWH5 1172 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CATSPER1Q8NEC5 780 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 TFB2MQ9H5Q4 396 aaKnown RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 OXSMQ9NWU1 459 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 TAS2R13Q9NYV9 303 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF711Q9Y462 761 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 IFRD1O00458 451 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 MGEA5O60502 916 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 PROCP04070 461 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 LCP1P13796 627 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 NFKB1P19838 968 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 DCDC1P59894 354 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 MTX3Q5HYI7 312 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 FAM171A1Q5VUB5 890 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 C1orf228Q6PIY5 440 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 AADATQ8N5Z0 425 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 OR2W6PQ8NHA6 318 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 ARRDC2Q8TBH0 407 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 SKA1Q96BD8 255 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 SERPINI1Q99574 410 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 PDFQ9HBH1 243 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 EML4Q9HC35 981 aaKnown RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 TMEM30AQ9NV96 361 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 MAD1L1Q9Y6D9 718 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 BBIP1A8MTZ0 92 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 LILRB3O75022 631 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 WISP3O95389 354 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 RALBP11234 206 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CPA3P15088 417 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF30P17039 623 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 GJC1P36383 396 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 GRIA4P48058 902 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 AP1S2P56377 157 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 FOXM1Q08050 763 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 SLC10A2Q12908 348 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 LVRNQ6Q4G3 990 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CPSF7Q8N684 471 aaKnown RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 CPEB1Q9BZB8 566 aaKnown RBP5.92□□□□□ -1.46
PTPRD-206ENST00000397617 PLAC1Q9HBJ0 212 aa5.92□□□□□ -1.46
PTPRD-206ENST00000397617 GPAMQ9HCL2 828 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms