RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DDX5P17844 614 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PBLDP30039 288 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 NKX3-2P78367 333 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 DSC2Q02487 901 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ART3Q13508 389 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PAFAH1B3Q15102 231 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CCDC85BQ15834 202 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 SLC9A4Q6AI14 798 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 SUGP1Q8IWZ8 645 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 AHI1Q8N157 1196 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 MREGQ8N565 214 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 UBR7Q8N806 425 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PRCCQ92733 491 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 MRGBPQ9NV56 204 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 KIF13BQ9NQT8 1826 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 GOLGA8TH3BQL2 631 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 TM9SF1O15321 606 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 BUD23O43709 281 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CCDC22O60826 627 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PIRTP0C851 137 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PYGBP11216 843 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CTPS1P17812 591 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ECT2LQ008S8 904 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CSHL1Q14406 222 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 HIBCHQ6NVY1 386 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 SRLQ86TD4 932 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 NLRP14Q86W24 1093 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CMTM8Q8IZV2 173 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CPT1BQ92523 772 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 FAM136AQ96C01 138 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ABHD8Q96I13 439 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CLSTN3Q9BQT9 956 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CTNNAL1Q9UBT7 734 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 WNT6Q9Y6F9 365 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ATAD5Q96QE3 1844 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 TPBGLP0DKB5 382 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ALADP13716 330 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CASP2P42575 452 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 GPR1P46091 355 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ARL4DP49703 201 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 TMEM240Q5SV17 173 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 MSANTD2Q6P1R3 559 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 OOSP2Q86WS3 158 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 AGR3Q8TD06 166 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 HERVK_113Q902F9 699 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PGM2Q96G03 612 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 PHACTR1Q9C0D0 580 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 MANSC1Q9H8J5 431 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ZFYVE1Q9HBF4 777 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 NMRAL1Q9HBL8 299 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 CSNK1G1Q9HCP0 422 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 EIF2B3Q9NR50 452 aaKnown RBP8.36□□□□□ -1.07
PTPRD-204ENST00000397606 TMEM248Q9NWD8 314 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 ANKRD6Q9Y2G4 727 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 NR2E1Q9Y466 385 aa8.36□□□□□ -1.07
PTPRD-204ENST00000397606 A0A096LPK6 155 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 RFPL2O75678 378 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 PFKPQ01813 784 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 MBTPS1Q14703 1052 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 PKN3Q6P5Z2 889 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TAS1R1Q7RTX1 841 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SCML4Q8N228 414 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 C12orf76Q8N812 135 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TNKS2Q9H2K2 1166 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 ACSS3Q9H6R3 686 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SYBUQ9NX95 663 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 ZNF212Q9UDV6 495 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 FCF1Q9Y324 198 aaKnown RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TRIM43BA6NCK2 446 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 MAGEA10P43363 369 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 GLRBP48167 497 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CLCN5P51795 746 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 ZNF844Q08AG5 666 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 DLG2Q15700 870 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CHI3L2Q15782 390 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 HIST2H2ACQ16777 129 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 MBLAC2Q68D91 279 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 HIST2H2AA3Q6FI13 130 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 RAET1GQ6H3X3 334 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 TRIM43Q96BQ3 446 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 ERLEC1Q96DZ1 483 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 RPL10LQ96L21 214 aaKnown RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 LRRC37BQ96QE4 947 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 FCRL5Q96RD9 977 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 CRISPLD2Q9H0B8 497 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 WDR6Q9NNW5 1121 aaKnown RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 ERVW-1Q9UQF0 538 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 PDZK1P1A8MUH7 402 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 KPNA5O15131 536 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SUPT7LO94864 414 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SCAPQ12770 1279 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 BOP1Q14137 746 aaKnown RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 HABP4Q5JVS0 413 aaKnown RBP8.35□□□□□ -1.07
PTPRD-204ENST00000397606 SLC22A9Q8IVM8 553 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 PHACTR4Q8IZ21 702 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 OR4L1Q8NH43 312 aa8.35□□□□□ -1.07
PTPRD-204ENST00000397606 HEXDCQ8WVB3 486 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms