RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SYCP2LQ5T4T6 812 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 MARC1Q5VT66 337 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 GDPD4Q6W3E5 623 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 RGL4Q8IZJ4 473 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 UBL4BQ8N7F7 174 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 KLHL32Q96NJ5 620 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 TSGA13Q96PP4 275 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 KCNF1Q9H3M0 494 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 SMOC1Q9H4F8 434 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 PARD6AQ9NPB6 346 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 MATN3O15232 486 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 LRP3O75074 770 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 GJB3O75712 270 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 CCNCP24863 283 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 MAOBP27338 520 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 HSPA9P38646 679 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 CSNK1DP48730 415 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 TAS2R38P59533 333 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 COPS2P61201 443 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 CCDC15Q0P6D6 951 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 PDK1Q15118 436 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 WDR45BQ5MNZ6 344 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 KIAA0895LQ68EN5 471 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 SRLQ86TD4 932 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 SYT12Q8IV01 421 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 PGBD5Q8N414 524 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 MAML1Q92585 1016 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 OLFM3Q96PB7 478 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 LGMNQ99538 433 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 MGME1Q9BQP7 344 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 HEMGNQ9BXL5 484 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 TMEM74BQ9NUR3 256 aa21.46■■□□□ 1.03
TSPAN4-206ENST00000397408 ZNF292O60281 2723 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3DA0A087WVF3 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3IA0A087WXS9 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3EA0A087X179 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3KA0A087X1G2 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3FA6NER0 549 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3LB9A6J9 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 PPP1R12AO14974 1030 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 DDX3YO15523 660 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3HP0C7X1 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 ADRB3P13945 408 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 PECAM1P16284 738 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TGM2P21980 687 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 DPP6P42658 865 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 SCNN1BP51168 640 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 MAXP61244 160 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 PPIDQ08752 370 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 NSUN2Q08J23 767 aaKnown RBP eCLIP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 HNRNPDQ14103 355 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 GRM3Q14832 879 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 PLA2G2CQ5R387 149 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3GQ6DHY5 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3CQ6IPX1 549 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 FBXL19Q6PCT2 694 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 CCDC13Q8IYE1 715 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TBC1D3Q8IZP1 549 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TEX26Q8N6G2 289 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 FATE1Q969F0 183 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 BIRC7Q96CA5 298 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 HAUS1Q96CS2 278 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TUBGCP5Q96RT8 1024 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 CPEB1Q9BZB8 566 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 NT5MQ9NPB1 228 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 VPS45Q9NRW7 570 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 SEMA4GQ9NTN9 838 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 SAE1Q9UBE0 346 aaPredicted RBP21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 PILRBQ9UKJ0 227 aa21.45■■□□□ 1.02
TSPAN4-206ENST00000397408 TTC24A2A3L6 582 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 C16orf96A6NNT2 1141 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 IGHV4-34P06331 123 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 PYGMP11217 842 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 NR2C2P49116 596 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 AP1S1P61966 158 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 PPP2CBP62714 309 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 PPP2CAP67775 309 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 PEAR1Q5VY43 1037 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 AADACL2Q6P093 401 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 BBS12Q6ZW61 710 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 DNASE2BQ8WZ79 361 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 HES6Q96HZ4 224 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 ALS2CR12Q96Q35 445 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 HERPUD2Q9BSE4 406 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 OSBPL8Q9BZF1 889 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 MIR1-1HGQ9H1L0 117 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 KDM4CQ9H3R0 1056 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 ATP13A3Q9H7F0 1226 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 PREBQ9HCU5 417 aa21.44■■□□□ 1.02
TSPAN4-206ENST00000397408 NEBLO76041 1014 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 CCNB1P14635 433 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 CR2P20023 1033 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 TGM1P22735 817 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 HOXD11P31277 338 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 PTPN7P35236 360 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 HOXD12P35452 270 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 CETN2P41208 172 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 ABL2P42684 1182 aa21.43■■□□□ 1.02
TSPAN4-206ENST00000397408 MAPK8P45983 427 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms