RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SHROOM3Q8TF72 1996 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 COL4A2P08572 1712 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 A0A0D9SEW6 157 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 TULP3O75386 442 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 APRTP07741 180 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 MLNP12872 115 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 PRKCHP24723 683 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 MZF1P28698 734 aaPredicted RBP15.13■□□□□ 0.01
CAPN3-207ENST00000397200 HLA-FP30511 346 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 GARSP41250 739 aaKnown RBP15.13■□□□□ 0.01
CAPN3-207ENST00000397200 DGKGP49619 791 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 PFKPQ01813 784 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 FAXCQ5TGI0 409 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 IL31Q6EBC2 164 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 RGS9BPQ6ZS82 235 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 LRRC49Q8IUZ0 686 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 CCNYQ8ND76 341 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 OR7D4Q8NG98 312 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 SIGLEC10Q96LC7 697 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 MAGEB18Q96M61 343 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 FEM1AQ9BSK4 669 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 BRD8Q9H0E9 1235 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 ATP13A1Q9HD20 1204 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 KCNK9Q9NPC2 374 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 NKIRAS1Q9NYS0 192 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 DEC1Q9P2X7 70 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 VPS28Q9UK41 221 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 COL6A3P12111 3177 aa15.13■□□□□ 0.01
CAPN3-207ENST00000397200 TCF20Q9UGU0 1960 aaKnown RBP15.12■□□□□ 0.01
CAPN3-207ENST00000397200 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.12■□□□□ 0.01
CAPN3-207ENST00000397200 MYO1CO00159 1063 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 NARSO43776 548 aaKnown RBP15.12■□□□□ 0.01
CAPN3-207ENST00000397200 SRFP11831 508 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 PABPC1P11940 636 aaKnown RBP15.12■□□□□ 0.01
CAPN3-207ENST00000397200 ACVRL1P37023 503 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 SLC6A11P48066 632 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 NUMBP49757 651 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 WDR4P57081 412 aaKnown RBP15.12■□□□□ 0.01
CAPN3-207ENST00000397200 WASHC5Q12768 1159 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 SERINC3Q13530 473 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 ITIH4Q14624 930 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 LRRC14Q15048 493 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 ASTLQ6HA08 431 aaPredicted RBP15.12■□□□□ 0.01
CAPN3-207ENST00000397200 GRAMD4Q6IC98 578 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 ANKRD42Q8N9B4 389 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 LRRN4Q8WUT4 740 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 HDAC11Q96DB2 347 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 LMLNQ96KR4 655 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 LGMNQ99538 433 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
CAPN3-207ENST00000397200 UNC80Q8N2C7 3258 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 RNF103O00237 685 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 AVILO75366 819 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 STK10O94804 968 aaKnown RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 CISD3P0C7P0 127 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 BMP1P13497 986 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 KRT15P19012 456 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 OPRD1P41143 372 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 EIF2DP41214 584 aaKnown RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 MSH2P43246 934 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 SOX9P48436 509 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 KDSRQ06136 332 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 PPIDQ08752 370 aaKnown RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 AP1B1Q10567 949 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 DMC1Q14565 340 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 PLEKHG6Q3KR16 790 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 PITRM1Q5JRX3 1037 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 ARHGAP36Q6ZRI8 547 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 APCDD1Q8J025 514 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 AHI1Q8N157 1196 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 DYDC1Q8WWB3 177 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 ALKBH8Q96BT7 664 aaKnown RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 ALG14Q96F25 216 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 C2orf49Q9BVC5 232 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 SP110Q9HB58 689 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 SLC2A4RGQ9NR83 387 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 IPO11Q9UI26 975 aaKnown RBP15.11■□□□□ 0.01
CAPN3-207ENST00000397200 SLC27A6Q9Y2P4 619 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 OR51B4Q9Y5P0 310 aa15.11■□□□□ 0.01
CAPN3-207ENST00000397200 A0A1W2PPM1 405 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 CBX4O00257 560 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 TRIM24O15164 1050 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 KDELR3O43731 214 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 PLK1P53350 603 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 ZNF33AQ06730 810 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 MTM1Q13496 603 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 KBTBD12Q3ZCT8 623 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 FUT11Q495W5 492 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 STEAP4Q687X5 459 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 TIGD7Q6NT04 549 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-207ENST00000397200 CYS1Q717R9 158 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 DCAF4L2Q8NA75 395 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 CCDC197Q8NCU1 140 aa15.1■□□□□ 0.01
CAPN3-207ENST00000397200 WFIKKN2Q8TEU8 576 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms